Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC29.96■■■□□ 2.39
RTL9Q8NET4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC29.96■■■□□ 2.39
RTL9Q8NET4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
RTL9Q8NET4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
RTL9Q8NET4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
RTL9Q8NET4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC29.95■■■□□ 2.39
RTL9Q8NET4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
RTL9Q8NET4 THA1P-201ENST00000590384 1145 ntBASIC29.95■■■□□ 2.39
RTL9Q8NET4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
RTL9Q8NET4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
RTL9Q8NET4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
RTL9Q8NET4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC29.94■■■□□ 2.38
RTL9Q8NET4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
RTL9Q8NET4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
RTL9Q8NET4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
RTL9Q8NET4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC29.93■■■□□ 2.38
RTL9Q8NET4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC29.93■■■□□ 2.38
RTL9Q8NET4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
RTL9Q8NET4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC29.93■■■□□ 2.38
RTL9Q8NET4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC29.93■■■□□ 2.38
RTL9Q8NET4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
RTL9Q8NET4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
RTL9Q8NET4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC29.93■■■□□ 2.38
RTL9Q8NET4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC29.93■■■□□ 2.38
RTL9Q8NET4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
RTL9Q8NET4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC29.91■■■□□ 2.38
RTL9Q8NET4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
RTL9Q8NET4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC29.91■■■□□ 2.38
RTL9Q8NET4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC29.9■■■□□ 2.38
RTL9Q8NET4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC29.9■■■□□ 2.38
RTL9Q8NET4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
RTL9Q8NET4 AC022616.5-201ENST00000518796 181 ntBASIC29.9■■■□□ 2.38
RTL9Q8NET4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC29.9■■■□□ 2.38
RTL9Q8NET4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
RTL9Q8NET4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC29.9■■■□□ 2.38
RTL9Q8NET4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
RTL9Q8NET4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC29.9■■■□□ 2.38
RTL9Q8NET4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
RTL9Q8NET4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC29.89■■■□□ 2.37
RTL9Q8NET4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.37
RTL9Q8NET4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC29.89■■■□□ 2.37
RTL9Q8NET4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
RTL9Q8NET4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC29.89■■■□□ 2.37
RTL9Q8NET4 AC019069.1-201ENST00000610008 1333 ntBASIC29.88■■■□□ 2.37
RTL9Q8NET4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
RTL9Q8NET4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC29.88■■■□□ 2.37
RTL9Q8NET4 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
RTL9Q8NET4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
RTL9Q8NET4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
RTL9Q8NET4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
RTL9Q8NET4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC29.87■■■□□ 2.37
RTL9Q8NET4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC29.86■■■□□ 2.37
RTL9Q8NET4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RTL9Q8NET4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC29.86■■■□□ 2.37
RTL9Q8NET4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
RTL9Q8NET4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
RTL9Q8NET4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC29.85■■■□□ 2.37
RTL9Q8NET4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC29.85■■■□□ 2.37
RTL9Q8NET4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
RTL9Q8NET4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
RTL9Q8NET4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
RTL9Q8NET4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC29.84■■■□□ 2.37
RTL9Q8NET4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
RTL9Q8NET4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC29.83■■■□□ 2.37
RTL9Q8NET4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
RTL9Q8NET4 AL356441.2-201ENST00000443009 864 ntBASIC29.83■■■□□ 2.37
RTL9Q8NET4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.37
RTL9Q8NET4 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
RTL9Q8NET4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC29.83■■■□□ 2.37
RTL9Q8NET4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC29.82■■■□□ 2.36
RTL9Q8NET4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC29.82■■■□□ 2.36
RTL9Q8NET4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
RTL9Q8NET4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
RTL9Q8NET4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC29.81■■■□□ 2.36
RTL9Q8NET4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
RTL9Q8NET4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
RTL9Q8NET4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
RTL9Q8NET4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC29.8■■■□□ 2.36
RTL9Q8NET4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
RTL9Q8NET4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC29.8■■■□□ 2.36
RTL9Q8NET4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
RTL9Q8NET4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
RTL9Q8NET4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC29.79■■■□□ 2.36
RTL9Q8NET4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC29.79■■■□□ 2.36
RTL9Q8NET4 Z92544.1-202ENST00000571933 1220 ntBASIC29.79■■■□□ 2.36
RTL9Q8NET4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
RTL9Q8NET4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC29.79■■■□□ 2.36
RTL9Q8NET4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
RTL9Q8NET4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
RTL9Q8NET4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC29.78■■■□□ 2.36
RTL9Q8NET4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC29.77■■■□□ 2.36
RTL9Q8NET4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC29.77■■■□□ 2.36
RTL9Q8NET4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC29.77■■■□□ 2.36
RTL9Q8NET4 KRT18P24-201ENST00000344739 1156 ntBASIC29.77■■■□□ 2.36
RTL9Q8NET4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC29.77■■■□□ 2.36
RTL9Q8NET4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
RTL9Q8NET4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
RTL9Q8NET4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
RTL9Q8NET4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC29.76■■■□□ 2.35
RTL9Q8NET4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms