Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC38.27■■■■□ 3.72
CFAP43Q8NDM7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC38.27■■■■□ 3.72
CFAP43Q8NDM7 AC131281.2-201ENST00000520478 145 ntBASIC38.27■■■■□ 3.72
CFAP43Q8NDM7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC38.26■■■■□ 3.72
CFAP43Q8NDM7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC38.26■■■■□ 3.71
CFAP43Q8NDM7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC38.26■■■■□ 3.71
CFAP43Q8NDM7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC38.25■■■■□ 3.71
CFAP43Q8NDM7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC38.25■■■■□ 3.71
CFAP43Q8NDM7 MIR4787-201ENST00000607364 84 ntBASIC38.25■■■■□ 3.71
CFAP43Q8NDM7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC38.25■■■■□ 3.71
CFAP43Q8NDM7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC38.24■■■■□ 3.71
CFAP43Q8NDM7 BX664725.1-201ENST00000438252 379 ntBASIC38.24■■■■□ 3.71
CFAP43Q8NDM7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC38.24■■■■□ 3.71
CFAP43Q8NDM7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC38.24■■■■□ 3.71
CFAP43Q8NDM7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC38.24■■■■□ 3.71
CFAP43Q8NDM7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC38.24■■■■□ 3.71
CFAP43Q8NDM7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC38.24■■■■□ 3.71
CFAP43Q8NDM7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC38.23■■■■□ 3.71
CFAP43Q8NDM7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC38.23■■■■□ 3.71
CFAP43Q8NDM7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC38.23■■■■□ 3.71
CFAP43Q8NDM7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC38.23■■■■□ 3.71
CFAP43Q8NDM7 AC142472.1-201ENST00000612013 1741 ntBASIC38.22■■■■□ 3.71
CFAP43Q8NDM7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC38.22■■■■□ 3.71
CFAP43Q8NDM7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC38.21■■■■□ 3.71
CFAP43Q8NDM7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
CFAP43Q8NDM7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC38.2■■■■□ 3.71
CFAP43Q8NDM7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC38.2■■■■□ 3.71
CFAP43Q8NDM7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
CFAP43Q8NDM7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC38.2■■■■□ 3.71
CFAP43Q8NDM7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
CFAP43Q8NDM7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC38.2■■■■□ 3.71
CFAP43Q8NDM7 KRT125P-201ENST00000546827 989 ntBASIC38.2■■■■□ 3.71
CFAP43Q8NDM7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC38.19■■■■□ 3.7
CFAP43Q8NDM7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC38.19■■■■□ 3.7
CFAP43Q8NDM7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC38.19■■■■□ 3.7
CFAP43Q8NDM7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC38.19■■■■□ 3.7
CFAP43Q8NDM7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC38.18■■■■□ 3.7
CFAP43Q8NDM7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC38.18■■■■□ 3.7
CFAP43Q8NDM7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC38.17■■■■□ 3.7
CFAP43Q8NDM7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC38.17■■■■□ 3.7
CFAP43Q8NDM7 AL139246.5-201ENST00000606645 996 ntBASIC38.17■■■■□ 3.7
CFAP43Q8NDM7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC38.17■■■■□ 3.7
CFAP43Q8NDM7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC38.17■■■■□ 3.7
CFAP43Q8NDM7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC38.17■■■■□ 3.7
CFAP43Q8NDM7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC38.16■■■■□ 3.7
CFAP43Q8NDM7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC38.15■■■■□ 3.7
CFAP43Q8NDM7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC38.15■■■■□ 3.7
CFAP43Q8NDM7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
CFAP43Q8NDM7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
CFAP43Q8NDM7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC38.14■■■■□ 3.7
CFAP43Q8NDM7 RALB-208ENST00000631312 311 ntTSL 5 BASIC38.14■■■■□ 3.7
CFAP43Q8NDM7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC38.13■■■■□ 3.69
CFAP43Q8NDM7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC38.13■■■■□ 3.69
CFAP43Q8NDM7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC38.13■■■■□ 3.69
CFAP43Q8NDM7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC38.13■■■■□ 3.69
CFAP43Q8NDM7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
CFAP43Q8NDM7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC38.12■■■■□ 3.69
CFAP43Q8NDM7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC38.12■■■■□ 3.69
CFAP43Q8NDM7 RPS2P7-201ENST00000447334 885 ntBASIC38.11■■■■□ 3.69
CFAP43Q8NDM7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC38.11■■■■□ 3.69
CFAP43Q8NDM7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC38.11■■■■□ 3.69
CFAP43Q8NDM7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC38.11■■■■□ 3.69
CFAP43Q8NDM7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC38.1■■■■□ 3.69
CFAP43Q8NDM7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC38.1■■■■□ 3.69
CFAP43Q8NDM7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC38.1■■■■□ 3.69
CFAP43Q8NDM7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
CFAP43Q8NDM7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC38.09■■■■□ 3.69
CFAP43Q8NDM7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC38.09■■■■□ 3.69
CFAP43Q8NDM7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC38.09■■■■□ 3.69
CFAP43Q8NDM7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC38.09■■■■□ 3.69
CFAP43Q8NDM7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC38.08■■■■□ 3.69
CFAP43Q8NDM7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
CFAP43Q8NDM7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC38.08■■■■□ 3.69
CFAP43Q8NDM7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC38.08■■■■□ 3.69
CFAP43Q8NDM7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC38.07■■■■□ 3.69
CFAP43Q8NDM7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC38.07■■■■□ 3.68
CFAP43Q8NDM7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC38.07■■■■□ 3.68
CFAP43Q8NDM7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC38.07■■■■□ 3.68
CFAP43Q8NDM7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC38.06■■■■□ 3.68
CFAP43Q8NDM7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC38.06■■■■□ 3.68
CFAP43Q8NDM7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC38.06■■■■□ 3.68
CFAP43Q8NDM7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC38.06■■■■□ 3.68
CFAP43Q8NDM7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
CFAP43Q8NDM7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC38.05■■■■□ 3.68
CFAP43Q8NDM7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC38.05■■■■□ 3.68
CFAP43Q8NDM7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC38.05■■■■□ 3.68
CFAP43Q8NDM7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC38.05■■■■□ 3.68
CFAP43Q8NDM7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC38.05■■■■□ 3.68
CFAP43Q8NDM7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC38.05■■■■□ 3.68
CFAP43Q8NDM7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC38.04■■■■□ 3.68
CFAP43Q8NDM7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC38.04■■■■□ 3.68
CFAP43Q8NDM7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC38.04■■■■□ 3.68
CFAP43Q8NDM7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC38.04■■■■□ 3.68
CFAP43Q8NDM7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC38.04■■■■□ 3.68
CFAP43Q8NDM7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC38.04■■■■□ 3.68
CFAP43Q8NDM7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC38.04■■■■□ 3.68
CFAP43Q8NDM7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC38.04■■■■□ 3.68
CFAP43Q8NDM7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC38.03■■■■□ 3.68
CFAP43Q8NDM7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
CFAP43Q8NDM7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms