Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PGBD3Q8N328 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PGBD3Q8N328 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PGBD3Q8N328 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PGBD3Q8N328 LONRF2P2-201ENST00000439212 571 ntBASIC24.44■■□□□ 1.5
PGBD3Q8N328 AL356441.2-201ENST00000443009 864 ntBASIC24.44■■□□□ 1.5
PGBD3Q8N328 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PGBD3Q8N328 TK2-216ENST00000564917 1156 ntTSL 3 BASIC24.44■■□□□ 1.5
PGBD3Q8N328 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC24.44■■□□□ 1.5
PGBD3Q8N328 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.44■■□□□ 1.5
PGBD3Q8N328 AL449106.1-201ENST00000608517 1980 ntBASIC24.43■■□□□ 1.5
PGBD3Q8N328 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.43■■□□□ 1.5
PGBD3Q8N328 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PGBD3Q8N328 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
PGBD3Q8N328 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PGBD3Q8N328 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PGBD3Q8N328 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PGBD3Q8N328 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PGBD3Q8N328 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PGBD3Q8N328 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PGBD3Q8N328 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.42■■□□□ 1.5
PGBD3Q8N328 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
PGBD3Q8N328 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.42■■□□□ 1.5
PGBD3Q8N328 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
PGBD3Q8N328 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.4■■□□□ 1.5
PGBD3Q8N328 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PGBD3Q8N328 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
PGBD3Q8N328 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC24.39■■□□□ 1.49
PGBD3Q8N328 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.38■■□□□ 1.49
PGBD3Q8N328 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PGBD3Q8N328 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.38■■□□□ 1.49
PGBD3Q8N328 KRT18P10-201ENST00000388836 1287 ntBASIC24.38■■□□□ 1.49
PGBD3Q8N328 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC24.38■■□□□ 1.49
PGBD3Q8N328 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.38■■□□□ 1.49
PGBD3Q8N328 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
PGBD3Q8N328 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PGBD3Q8N328 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PGBD3Q8N328 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PGBD3Q8N328 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PGBD3Q8N328 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC24.37■■□□□ 1.49
PGBD3Q8N328 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
PGBD3Q8N328 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PGBD3Q8N328 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PGBD3Q8N328 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PGBD3Q8N328 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PGBD3Q8N328 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.37■■□□□ 1.49
PGBD3Q8N328 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
PGBD3Q8N328 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC24.36■■□□□ 1.49
PGBD3Q8N328 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PGBD3Q8N328 Z92544.1-202ENST00000571933 1220 ntBASIC24.36■■□□□ 1.49
PGBD3Q8N328 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.36■■□□□ 1.49
PGBD3Q8N328 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
PGBD3Q8N328 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24.35■■□□□ 1.49
PGBD3Q8N328 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PGBD3Q8N328 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.35■■□□□ 1.49
PGBD3Q8N328 KRT125P-201ENST00000546827 989 ntBASIC24.35■■□□□ 1.49
PGBD3Q8N328 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PGBD3Q8N328 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PGBD3Q8N328 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
PGBD3Q8N328 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.34■■□□□ 1.49
PGBD3Q8N328 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.34■■□□□ 1.49
PGBD3Q8N328 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
PGBD3Q8N328 AC019069.1-201ENST00000610008 1333 ntBASIC24.34■■□□□ 1.49
PGBD3Q8N328 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PGBD3Q8N328 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PGBD3Q8N328 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PGBD3Q8N328 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
PGBD3Q8N328 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PGBD3Q8N328 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.33■■□□□ 1.48
PGBD3Q8N328 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PGBD3Q8N328 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
PGBD3Q8N328 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PGBD3Q8N328 BX664725.1-201ENST00000438252 379 ntBASIC24.32■■□□□ 1.48
PGBD3Q8N328 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.32■■□□□ 1.48
PGBD3Q8N328 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.32■■□□□ 1.48
PGBD3Q8N328 LINC01003-201ENST00000564834 1764 ntBASIC24.31■■□□□ 1.48
PGBD3Q8N328 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.31■■□□□ 1.48
PGBD3Q8N328 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PGBD3Q8N328 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PGBD3Q8N328 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PGBD3Q8N328 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PGBD3Q8N328 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC24.31■■□□□ 1.48
PGBD3Q8N328 AC022616.5-201ENST00000518796 181 ntBASIC24.31■■□□□ 1.48
PGBD3Q8N328 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.31■■□□□ 1.48
PGBD3Q8N328 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PGBD3Q8N328 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
PGBD3Q8N328 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC24.31■■□□□ 1.48
PGBD3Q8N328 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PGBD3Q8N328 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
PGBD3Q8N328 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PGBD3Q8N328 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.3■■□□□ 1.48
PGBD3Q8N328 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
PGBD3Q8N328 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
PGBD3Q8N328 AL121749.1-202ENST00000609313 2153 ntBASIC24.3■■□□□ 1.48
PGBD3Q8N328 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
PGBD3Q8N328 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PGBD3Q8N328 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PGBD3Q8N328 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
PGBD3Q8N328 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PGBD3Q8N328 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms