Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.01■■□□□ 1.75
VPS52Q8N1B4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
VPS52Q8N1B4 LINC01003-201ENST00000564834 1764 ntBASIC26■■□□□ 1.75
VPS52Q8N1B4 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
VPS52Q8N1B4 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
VPS52Q8N1B4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
VPS52Q8N1B4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
VPS52Q8N1B4 THA1P-201ENST00000590384 1145 ntBASIC26■■□□□ 1.75
VPS52Q8N1B4 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
VPS52Q8N1B4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
VPS52Q8N1B4 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26■■□□□ 1.75
VPS52Q8N1B4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
VPS52Q8N1B4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
VPS52Q8N1B4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC25.99■■□□□ 1.75
VPS52Q8N1B4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
VPS52Q8N1B4 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
VPS52Q8N1B4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
VPS52Q8N1B4 AL121749.1-202ENST00000609313 2153 ntBASIC25.98■■□□□ 1.75
VPS52Q8N1B4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC25.98■■□□□ 1.75
VPS52Q8N1B4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
VPS52Q8N1B4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC25.97■■□□□ 1.75
VPS52Q8N1B4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
VPS52Q8N1B4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC25.97■■□□□ 1.75
VPS52Q8N1B4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.97■■□□□ 1.75
VPS52Q8N1B4 LONRF2P2-201ENST00000439212 571 ntBASIC25.97■■□□□ 1.75
VPS52Q8N1B4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
VPS52Q8N1B4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
VPS52Q8N1B4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
VPS52Q8N1B4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
VPS52Q8N1B4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
VPS52Q8N1B4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25.96■■□□□ 1.75
VPS52Q8N1B4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
VPS52Q8N1B4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.96■■□□□ 1.75
VPS52Q8N1B4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
VPS52Q8N1B4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
VPS52Q8N1B4 AL449106.1-201ENST00000608517 1980 ntBASIC25.96■■□□□ 1.75
VPS52Q8N1B4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
VPS52Q8N1B4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
VPS52Q8N1B4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC25.95■■□□□ 1.74
VPS52Q8N1B4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC25.95■■□□□ 1.74
VPS52Q8N1B4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
VPS52Q8N1B4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.95■■□□□ 1.74
VPS52Q8N1B4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
VPS52Q8N1B4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.94■■□□□ 1.74
VPS52Q8N1B4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
VPS52Q8N1B4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.94■■□□□ 1.74
VPS52Q8N1B4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
VPS52Q8N1B4 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
VPS52Q8N1B4 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
VPS52Q8N1B4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.93■■□□□ 1.74
VPS52Q8N1B4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
VPS52Q8N1B4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
VPS52Q8N1B4 AC239859.2-201ENST00000444165 318 ntBASIC25.93■■□□□ 1.74
VPS52Q8N1B4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
VPS52Q8N1B4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
VPS52Q8N1B4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.92■■□□□ 1.74
VPS52Q8N1B4 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
VPS52Q8N1B4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.91■■□□□ 1.74
VPS52Q8N1B4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC25.91■■□□□ 1.74
VPS52Q8N1B4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
VPS52Q8N1B4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.91■■□□□ 1.74
VPS52Q8N1B4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
VPS52Q8N1B4 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
VPS52Q8N1B4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.9■■□□□ 1.74
VPS52Q8N1B4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
VPS52Q8N1B4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
VPS52Q8N1B4 AL356441.2-201ENST00000443009 864 ntBASIC25.9■■□□□ 1.74
VPS52Q8N1B4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
VPS52Q8N1B4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.89■■□□□ 1.74
VPS52Q8N1B4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
VPS52Q8N1B4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
VPS52Q8N1B4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
VPS52Q8N1B4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
VPS52Q8N1B4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.88■■□□□ 1.73
VPS52Q8N1B4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC25.88■■□□□ 1.73
VPS52Q8N1B4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
VPS52Q8N1B4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.88■■□□□ 1.73
VPS52Q8N1B4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
VPS52Q8N1B4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC25.87■■□□□ 1.73
VPS52Q8N1B4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
VPS52Q8N1B4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
VPS52Q8N1B4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
VPS52Q8N1B4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
VPS52Q8N1B4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC25.86■■□□□ 1.73
VPS52Q8N1B4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC25.86■■□□□ 1.73
VPS52Q8N1B4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
VPS52Q8N1B4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
VPS52Q8N1B4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.86■■□□□ 1.73
VPS52Q8N1B4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
VPS52Q8N1B4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
VPS52Q8N1B4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
VPS52Q8N1B4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.85■■□□□ 1.73
VPS52Q8N1B4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
VPS52Q8N1B4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
VPS52Q8N1B4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
VPS52Q8N1B4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
VPS52Q8N1B4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
VPS52Q8N1B4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.85■■□□□ 1.73
VPS52Q8N1B4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
VPS52Q8N1B4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.84■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms