Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL27A1Q8IZC6 KRT16P3-201ENST00000439127 1283 ntBASIC23.15■■□□□ 1.3
COL27A1Q8IZC6 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL27A1Q8IZC6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
COL27A1Q8IZC6 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL27A1Q8IZC6 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL27A1Q8IZC6 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.14■■□□□ 1.29
COL27A1Q8IZC6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL27A1Q8IZC6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL27A1Q8IZC6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.13■■□□□ 1.29
COL27A1Q8IZC6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL27A1Q8IZC6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
COL27A1Q8IZC6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
COL27A1Q8IZC6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
COL27A1Q8IZC6 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL27A1Q8IZC6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.12■■□□□ 1.29
COL27A1Q8IZC6 AC131281.2-201ENST00000520478 145 ntBASIC23.12■■□□□ 1.29
COL27A1Q8IZC6 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL27A1Q8IZC6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.11■■□□□ 1.29
COL27A1Q8IZC6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL27A1Q8IZC6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL27A1Q8IZC6 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL27A1Q8IZC6 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL27A1Q8IZC6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
COL27A1Q8IZC6 MIR4281-201ENST00000580852 62 ntBASIC23.11■■□□□ 1.29
COL27A1Q8IZC6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
COL27A1Q8IZC6 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
COL27A1Q8IZC6 KRT18P24-201ENST00000344739 1156 ntBASIC23.1■■□□□ 1.29
COL27A1Q8IZC6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL27A1Q8IZC6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.09■■□□□ 1.29
COL27A1Q8IZC6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
COL27A1Q8IZC6 AC137630.3-201ENST00000607245 391 ntBASIC23.09■■□□□ 1.29
COL27A1Q8IZC6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL27A1Q8IZC6 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.09■■□□□ 1.29
COL27A1Q8IZC6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.09■■□□□ 1.29
COL27A1Q8IZC6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.09■■□□□ 1.29
COL27A1Q8IZC6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
COL27A1Q8IZC6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.08■■□□□ 1.29
COL27A1Q8IZC6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL27A1Q8IZC6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL27A1Q8IZC6 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COL27A1Q8IZC6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL27A1Q8IZC6 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL27A1Q8IZC6 AC142472.1-201ENST00000612013 1741 ntBASIC23.06■■□□□ 1.28
COL27A1Q8IZC6 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL27A1Q8IZC6 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.06■■□□□ 1.28
COL27A1Q8IZC6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.06■■□□□ 1.28
COL27A1Q8IZC6 KRT125P-201ENST00000546827 989 ntBASIC23.06■■□□□ 1.28
COL27A1Q8IZC6 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL27A1Q8IZC6 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL27A1Q8IZC6 KRT18P10-201ENST00000388836 1287 ntBASIC23.05■■□□□ 1.28
COL27A1Q8IZC6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.05■■□□□ 1.28
COL27A1Q8IZC6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.05■■□□□ 1.28
COL27A1Q8IZC6 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL27A1Q8IZC6 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL27A1Q8IZC6 AC021242.3-201ENST00000607598 1377 ntBASIC23.05■■□□□ 1.28
COL27A1Q8IZC6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
COL27A1Q8IZC6 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.05■■□□□ 1.28
COL27A1Q8IZC6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.04■■□□□ 1.28
COL27A1Q8IZC6 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL27A1Q8IZC6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL27A1Q8IZC6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.03■■□□□ 1.28
COL27A1Q8IZC6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL27A1Q8IZC6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
COL27A1Q8IZC6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.03■■□□□ 1.28
COL27A1Q8IZC6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL27A1Q8IZC6 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL27A1Q8IZC6 BX255925.1-201ENST00000566954 1854 ntBASIC23.03■■□□□ 1.28
COL27A1Q8IZC6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL27A1Q8IZC6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL27A1Q8IZC6 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.02■■□□□ 1.28
COL27A1Q8IZC6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.02■■□□□ 1.28
COL27A1Q8IZC6 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL27A1Q8IZC6 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL27A1Q8IZC6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL27A1Q8IZC6 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
COL27A1Q8IZC6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.01■■□□□ 1.27
COL27A1Q8IZC6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.01■■□□□ 1.27
COL27A1Q8IZC6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
COL27A1Q8IZC6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL27A1Q8IZC6 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
COL27A1Q8IZC6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
COL27A1Q8IZC6 AC120024.1-201ENST00000562672 995 ntBASIC23■■□□□ 1.27
COL27A1Q8IZC6 AC008406.3-201ENST00000620001 1374 ntBASIC23■■□□□ 1.27
COL27A1Q8IZC6 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL27A1Q8IZC6 MIR638-201ENST00000385237 100 ntBASIC23■■□□□ 1.27
COL27A1Q8IZC6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23■■□□□ 1.27
COL27A1Q8IZC6 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23■■□□□ 1.27
COL27A1Q8IZC6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL27A1Q8IZC6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL27A1Q8IZC6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL27A1Q8IZC6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.99■■□□□ 1.27
COL27A1Q8IZC6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.99■■□□□ 1.27
COL27A1Q8IZC6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
COL27A1Q8IZC6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.98■■□□□ 1.27
COL27A1Q8IZC6 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
COL27A1Q8IZC6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.98■■□□□ 1.27
COL27A1Q8IZC6 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.98■■□□□ 1.27
COL27A1Q8IZC6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL27A1Q8IZC6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms