Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
VPS36Q86VN1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
VPS36Q86VN1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
VPS36Q86VN1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
VPS36Q86VN1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
VPS36Q86VN1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
VPS36Q86VN1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.75■■□□□ 1.71
VPS36Q86VN1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
VPS36Q86VN1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
VPS36Q86VN1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
VPS36Q86VN1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
VPS36Q86VN1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
VPS36Q86VN1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.74■■□□□ 1.71
VPS36Q86VN1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
VPS36Q86VN1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
VPS36Q86VN1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
VPS36Q86VN1 AC022211.4-201ENST00000625094 2161 ntBASIC25.74■■□□□ 1.71
VPS36Q86VN1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
VPS36Q86VN1 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
VPS36Q86VN1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.74■■□□□ 1.71
VPS36Q86VN1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
VPS36Q86VN1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
VPS36Q86VN1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
VPS36Q86VN1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
VPS36Q86VN1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
VPS36Q86VN1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
VPS36Q86VN1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
VPS36Q86VN1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
VPS36Q86VN1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.72■■□□□ 1.71
VPS36Q86VN1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
VPS36Q86VN1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
VPS36Q86VN1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.72■■□□□ 1.71
VPS36Q86VN1 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
VPS36Q86VN1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.71■■□□□ 1.71
VPS36Q86VN1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.71■■□□□ 1.71
VPS36Q86VN1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.71■■□□□ 1.71
VPS36Q86VN1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.71■■□□□ 1.71
VPS36Q86VN1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
VPS36Q86VN1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
VPS36Q86VN1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
VPS36Q86VN1 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
VPS36Q86VN1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
VPS36Q86VN1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.7■■□□□ 1.7
VPS36Q86VN1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
VPS36Q86VN1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
VPS36Q86VN1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.69■■□□□ 1.7
VPS36Q86VN1 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC25.69■■□□□ 1.7
VPS36Q86VN1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
VPS36Q86VN1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
VPS36Q86VN1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
VPS36Q86VN1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
VPS36Q86VN1 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC25.68■■□□□ 1.7
VPS36Q86VN1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
VPS36Q86VN1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
VPS36Q86VN1 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.68■■□□□ 1.7
VPS36Q86VN1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
VPS36Q86VN1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
VPS36Q86VN1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
VPS36Q86VN1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.67■■□□□ 1.7
VPS36Q86VN1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
VPS36Q86VN1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.67■■□□□ 1.7
VPS36Q86VN1 AC093323.1-202ENST00000635031 2045 ntBASIC25.66■■□□□ 1.7
VPS36Q86VN1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC25.66■■□□□ 1.7
VPS36Q86VN1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.66■■□□□ 1.7
VPS36Q86VN1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.66■■□□□ 1.7
VPS36Q86VN1 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
VPS36Q86VN1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
VPS36Q86VN1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.65■■□□□ 1.7
VPS36Q86VN1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
VPS36Q86VN1 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
VPS36Q86VN1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
VPS36Q86VN1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.65■■□□□ 1.7
VPS36Q86VN1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.65■■□□□ 1.7
VPS36Q86VN1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
VPS36Q86VN1 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
VPS36Q86VN1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
VPS36Q86VN1 AC097639.1-201ENST00000565519 1891 ntBASIC25.64■■□□□ 1.7
VPS36Q86VN1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.64■■□□□ 1.7
VPS36Q86VN1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
VPS36Q86VN1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
VPS36Q86VN1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
VPS36Q86VN1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.64■■□□□ 1.7
VPS36Q86VN1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
VPS36Q86VN1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
VPS36Q86VN1 AC138932.3-201ENST00000567634 1902 ntBASIC25.64■■□□□ 1.69
VPS36Q86VN1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
VPS36Q86VN1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
VPS36Q86VN1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
VPS36Q86VN1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
VPS36Q86VN1 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC25.63■■□□□ 1.69
VPS36Q86VN1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
VPS36Q86VN1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
VPS36Q86VN1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
VPS36Q86VN1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
VPS36Q86VN1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
VPS36Q86VN1 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
VPS36Q86VN1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.62■■□□□ 1.69
VPS36Q86VN1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
VPS36Q86VN1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
VPS36Q86VN1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 243 ms