Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSMD2Q7Z408 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.7■□□□□ 0.9
CSMD2Q7Z408 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSMD2Q7Z408 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CSMD2Q7Z408 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CSMD2Q7Z408 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSMD2Q7Z408 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSMD2Q7Z408 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.69■□□□□ 0.9
CSMD2Q7Z408 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.69■□□□□ 0.9
CSMD2Q7Z408 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSMD2Q7Z408 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSMD2Q7Z408 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CSMD2Q7Z408 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CSMD2Q7Z408 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSMD2Q7Z408 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSMD2Q7Z408 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.68■□□□□ 0.9
CSMD2Q7Z408 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.68■□□□□ 0.9
CSMD2Q7Z408 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.67■□□□□ 0.9
CSMD2Q7Z408 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.67■□□□□ 0.9
CSMD2Q7Z408 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSMD2Q7Z408 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSMD2Q7Z408 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.67■□□□□ 0.9
CSMD2Q7Z408 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.67■□□□□ 0.9
CSMD2Q7Z408 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSMD2Q7Z408 KRT18P24-201ENST00000344739 1156 ntBASIC20.66■□□□□ 0.9
CSMD2Q7Z408 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSMD2Q7Z408 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSMD2Q7Z408 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSMD2Q7Z408 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CSMD2Q7Z408 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.65■□□□□ 0.9
CSMD2Q7Z408 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC20.65■□□□□ 0.9
CSMD2Q7Z408 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CSMD2Q7Z408 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CSMD2Q7Z408 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CSMD2Q7Z408 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CSMD2Q7Z408 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CSMD2Q7Z408 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.64■□□□□ 0.89
CSMD2Q7Z408 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CSMD2Q7Z408 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CSMD2Q7Z408 AC090192.1-201ENST00000517740 490 ntBASIC20.63■□□□□ 0.89
CSMD2Q7Z408 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.63■□□□□ 0.89
CSMD2Q7Z408 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CSMD2Q7Z408 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CSMD2Q7Z408 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CSMD2Q7Z408 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSMD2Q7Z408 MIR6821-201ENST00000617625 74 ntBASIC20.63■□□□□ 0.89
CSMD2Q7Z408 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSMD2Q7Z408 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CSMD2Q7Z408 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CSMD2Q7Z408 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
CSMD2Q7Z408 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.62■□□□□ 0.89
CSMD2Q7Z408 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.62■□□□□ 0.89
CSMD2Q7Z408 WHAMMP3-201ENST00000611636 1609 ntBASIC20.62■□□□□ 0.89
CSMD2Q7Z408 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CSMD2Q7Z408 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.62■□□□□ 0.89
CSMD2Q7Z408 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.62■□□□□ 0.89
CSMD2Q7Z408 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CSMD2Q7Z408 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CSMD2Q7Z408 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CSMD2Q7Z408 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSMD2Q7Z408 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.61■□□□□ 0.89
CSMD2Q7Z408 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.61■□□□□ 0.89
CSMD2Q7Z408 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.61■□□□□ 0.89
CSMD2Q7Z408 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSMD2Q7Z408 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSMD2Q7Z408 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSMD2Q7Z408 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSMD2Q7Z408 AP004833.2-201ENST00000532228 1454 ntBASIC20.61■□□□□ 0.89
CSMD2Q7Z408 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSMD2Q7Z408 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSMD2Q7Z408 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.59■□□□□ 0.89
CSMD2Q7Z408 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSMD2Q7Z408 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSMD2Q7Z408 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CSMD2Q7Z408 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
CSMD2Q7Z408 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CSMD2Q7Z408 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.58■□□□□ 0.88
CSMD2Q7Z408 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CSMD2Q7Z408 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CSMD2Q7Z408 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.57■□□□□ 0.88
CSMD2Q7Z408 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSMD2Q7Z408 AC097381.1-201ENST00000429019 1296 ntBASIC20.57■□□□□ 0.88
CSMD2Q7Z408 AL162430.1-201ENST00000480705 870 ntBASIC20.57■□□□□ 0.88
CSMD2Q7Z408 AC142381.2-201ENST00000566120 298 ntBASIC20.57■□□□□ 0.88
CSMD2Q7Z408 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.57■□□□□ 0.88
CSMD2Q7Z408 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.57■□□□□ 0.88
CSMD2Q7Z408 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSMD2Q7Z408 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.57■□□□□ 0.88
CSMD2Q7Z408 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC20.56■□□□□ 0.88
CSMD2Q7Z408 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSMD2Q7Z408 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.56■□□□□ 0.88
CSMD2Q7Z408 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.56■□□□□ 0.88
CSMD2Q7Z408 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CSMD2Q7Z408 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CSMD2Q7Z408 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.56■□□□□ 0.88
CSMD2Q7Z408 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSMD2Q7Z408 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSMD2Q7Z408 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CSMD2Q7Z408 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.55■□□□□ 0.88
CSMD2Q7Z408 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms