Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LCA10Q71F78 ERN1-208ENST00000606895 2068 ntBASIC12.81□□□□□ -0.36
LCA10Q71F78 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LCA10Q71F78 AC092803.2-201ENST00000564287 1899 ntBASIC12.8□□□□□ -0.36
LCA10Q71F78 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LCA10Q71F78 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LCA10Q71F78 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC12.8□□□□□ -0.36
LCA10Q71F78 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LCA10Q71F78 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LCA10Q71F78 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LCA10Q71F78 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LCA10Q71F78 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LCA10Q71F78 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LCA10Q71F78 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC12.79□□□□□ -0.36
LCA10Q71F78 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC12.79□□□□□ -0.36
LCA10Q71F78 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LCA10Q71F78 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC12.79□□□□□ -0.36
LCA10Q71F78 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LCA10Q71F78 C1orf229-201ENST00000623686 2258 ntBASIC12.79□□□□□ -0.36
LCA10Q71F78 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LCA10Q71F78 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LCA10Q71F78 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LCA10Q71F78 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LCA10Q71F78 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LCA10Q71F78 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
LCA10Q71F78 BX255925.1-201ENST00000566954 1854 ntBASIC12.78□□□□□ -0.36
LCA10Q71F78 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LCA10Q71F78 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LCA10Q71F78 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
LCA10Q71F78 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
LCA10Q71F78 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LCA10Q71F78 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LCA10Q71F78 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LCA10Q71F78 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LCA10Q71F78 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LCA10Q71F78 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LCA10Q71F78 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LCA10Q71F78 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC12.78□□□□□ -0.36
LCA10Q71F78 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LCA10Q71F78 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LCA10Q71F78 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LCA10Q71F78 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LCA10Q71F78 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LCA10Q71F78 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC12.77□□□□□ -0.36
LCA10Q71F78 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LCA10Q71F78 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LCA10Q71F78 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LCA10Q71F78 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LCA10Q71F78 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LCA10Q71F78 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC12.77□□□□□ -0.37
LCA10Q71F78 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
LCA10Q71F78 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
LCA10Q71F78 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LCA10Q71F78 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
LCA10Q71F78 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LCA10Q71F78 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LCA10Q71F78 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LCA10Q71F78 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LCA10Q71F78 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LCA10Q71F78 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LCA10Q71F78 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC12.76□□□□□ -0.37
LCA10Q71F78 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC12.76□□□□□ -0.37
LCA10Q71F78 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC12.76□□□□□ -0.37
LCA10Q71F78 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC12.76□□□□□ -0.37
LCA10Q71F78 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LCA10Q71F78 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LCA10Q71F78 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC12.76□□□□□ -0.37
LCA10Q71F78 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LCA10Q71F78 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LCA10Q71F78 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LCA10Q71F78 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LCA10Q71F78 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC12.75□□□□□ -0.37
LCA10Q71F78 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC12.75□□□□□ -0.37
LCA10Q71F78 RARRES2P7-201ENST00000567349 469 ntBASIC12.75□□□□□ -0.37
LCA10Q71F78 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
LCA10Q71F78 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC12.74□□□□□ -0.37
LCA10Q71F78 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LCA10Q71F78 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
LCA10Q71F78 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LCA10Q71F78 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LCA10Q71F78 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LCA10Q71F78 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LCA10Q71F78 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LCA10Q71F78 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LCA10Q71F78 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC12.74□□□□□ -0.37
LCA10Q71F78 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LCA10Q71F78 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC12.74□□□□□ -0.37
LCA10Q71F78 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC12.74□□□□□ -0.37
LCA10Q71F78 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LCA10Q71F78 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LCA10Q71F78 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
LCA10Q71F78 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LCA10Q71F78 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
LCA10Q71F78 AL391422.3-201ENST00000603791 2761 ntBASIC12.74□□□□□ -0.37
LCA10Q71F78 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC12.74□□□□□ -0.37
LCA10Q71F78 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LCA10Q71F78 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC12.73□□□□□ -0.37
LCA10Q71F78 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LCA10Q71F78 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LCA10Q71F78 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms