Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.5■□□□□ 0.71
C9orf139Q6ZV77 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.5■□□□□ 0.71
C9orf139Q6ZV77 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.5■□□□□ 0.71
C9orf139Q6ZV77 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.5■□□□□ 0.71
C9orf139Q6ZV77 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
C9orf139Q6ZV77 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
C9orf139Q6ZV77 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
C9orf139Q6ZV77 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
C9orf139Q6ZV77 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
C9orf139Q6ZV77 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
C9orf139Q6ZV77 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
C9orf139Q6ZV77 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
C9orf139Q6ZV77 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
C9orf139Q6ZV77 GUSBP5-201ENST00000418136 578 ntBASIC19.49■□□□□ 0.71
C9orf139Q6ZV77 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
C9orf139Q6ZV77 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.49■□□□□ 0.71
C9orf139Q6ZV77 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.49■□□□□ 0.71
C9orf139Q6ZV77 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
C9orf139Q6ZV77 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
C9orf139Q6ZV77 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.48■□□□□ 0.71
C9orf139Q6ZV77 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C9orf139Q6ZV77 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
C9orf139Q6ZV77 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
C9orf139Q6ZV77 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
C9orf139Q6ZV77 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
C9orf139Q6ZV77 Z92544.1-202ENST00000571933 1220 ntBASIC19.47■□□□□ 0.71
C9orf139Q6ZV77 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
C9orf139Q6ZV77 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C9orf139Q6ZV77 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C9orf139Q6ZV77 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C9orf139Q6ZV77 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.46■□□□□ 0.71
C9orf139Q6ZV77 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
C9orf139Q6ZV77 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.45■□□□□ 0.7
C9orf139Q6ZV77 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf139Q6ZV77 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.45■□□□□ 0.7
C9orf139Q6ZV77 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
C9orf139Q6ZV77 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf139Q6ZV77 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.45■□□□□ 0.7
C9orf139Q6ZV77 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf139Q6ZV77 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf139Q6ZV77 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
C9orf139Q6ZV77 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
C9orf139Q6ZV77 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.44■□□□□ 0.7
C9orf139Q6ZV77 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.44■□□□□ 0.7
C9orf139Q6ZV77 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C9orf139Q6ZV77 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf139Q6ZV77 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf139Q6ZV77 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf139Q6ZV77 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf139Q6ZV77 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf139Q6ZV77 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.43■□□□□ 0.7
C9orf139Q6ZV77 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
C9orf139Q6ZV77 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
C9orf139Q6ZV77 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
C9orf139Q6ZV77 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C9orf139Q6ZV77 AP004609.3-201ENST00000610705 1884 ntBASIC19.41■□□□□ 0.7
C9orf139Q6ZV77 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
C9orf139Q6ZV77 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
C9orf139Q6ZV77 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
C9orf139Q6ZV77 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.41■□□□□ 0.7
C9orf139Q6ZV77 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C9orf139Q6ZV77 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.4■□□□□ 0.7
C9orf139Q6ZV77 KRT18P24-201ENST00000344739 1156 ntBASIC19.4■□□□□ 0.7
C9orf139Q6ZV77 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf139Q6ZV77 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf139Q6ZV77 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf139Q6ZV77 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.4■□□□□ 0.7
C9orf139Q6ZV77 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.4■□□□□ 0.7
C9orf139Q6ZV77 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf139Q6ZV77 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
C9orf139Q6ZV77 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
C9orf139Q6ZV77 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.39■□□□□ 0.69
C9orf139Q6ZV77 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C9orf139Q6ZV77 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C9orf139Q6ZV77 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C9orf139Q6ZV77 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
C9orf139Q6ZV77 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.38■□□□□ 0.69
C9orf139Q6ZV77 AC239859.2-201ENST00000444165 318 ntBASIC19.38■□□□□ 0.69
C9orf139Q6ZV77 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.38■□□□□ 0.69
C9orf139Q6ZV77 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
C9orf139Q6ZV77 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.38■□□□□ 0.69
C9orf139Q6ZV77 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
C9orf139Q6ZV77 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
C9orf139Q6ZV77 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
C9orf139Q6ZV77 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.37■□□□□ 0.69
C9orf139Q6ZV77 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
C9orf139Q6ZV77 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C9orf139Q6ZV77 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C9orf139Q6ZV77 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.36■□□□□ 0.69
C9orf139Q6ZV77 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
C9orf139Q6ZV77 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C9orf139Q6ZV77 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
C9orf139Q6ZV77 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
C9orf139Q6ZV77 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
C9orf139Q6ZV77 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C9orf139Q6ZV77 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
C9orf139Q6ZV77 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
C9orf139Q6ZV77 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C9orf139Q6ZV77 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
C9orf139Q6ZV77 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms