Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AL157400.5-201ENST00000507624 621 ntBASIC21.81■■□□□ 1.08
NIPAL3Q6P499 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NIPAL3Q6P499 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.81■■□□□ 1.08
NIPAL3Q6P499 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NIPAL3Q6P499 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
NIPAL3Q6P499 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NIPAL3Q6P499 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
NIPAL3Q6P499 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NIPAL3Q6P499 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.8■■□□□ 1.08
NIPAL3Q6P499 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
NIPAL3Q6P499 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NIPAL3Q6P499 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NIPAL3Q6P499 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.79■■□□□ 1.08
NIPAL3Q6P499 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.79■■□□□ 1.08
NIPAL3Q6P499 AC142381.3-201ENST00000568208 1670 ntBASIC21.79■■□□□ 1.08
NIPAL3Q6P499 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NIPAL3Q6P499 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NIPAL3Q6P499 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
NIPAL3Q6P499 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NIPAL3Q6P499 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.78■■□□□ 1.08
NIPAL3Q6P499 AC092296.2-201ENST00000589470 999 ntBASIC21.78■■□□□ 1.08
NIPAL3Q6P499 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NIPAL3Q6P499 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
NIPAL3Q6P499 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
NIPAL3Q6P499 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NIPAL3Q6P499 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
NIPAL3Q6P499 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NIPAL3Q6P499 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.77■■□□□ 1.08
NIPAL3Q6P499 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.77■■□□□ 1.08
NIPAL3Q6P499 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.77■■□□□ 1.07
NIPAL3Q6P499 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
NIPAL3Q6P499 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.76■■□□□ 1.07
NIPAL3Q6P499 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NIPAL3Q6P499 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.76■■□□□ 1.07
NIPAL3Q6P499 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
NIPAL3Q6P499 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.76■■□□□ 1.07
NIPAL3Q6P499 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NIPAL3Q6P499 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.76■■□□□ 1.07
NIPAL3Q6P499 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NIPAL3Q6P499 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NIPAL3Q6P499 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NIPAL3Q6P499 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.75■■□□□ 1.07
NIPAL3Q6P499 ECEL1P2-201ENST00000461596 1295 ntBASIC21.75■■□□□ 1.07
NIPAL3Q6P499 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
NIPAL3Q6P499 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NIPAL3Q6P499 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NIPAL3Q6P499 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
NIPAL3Q6P499 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NIPAL3Q6P499 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NIPAL3Q6P499 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
NIPAL3Q6P499 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NIPAL3Q6P499 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.73■■□□□ 1.07
NIPAL3Q6P499 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NIPAL3Q6P499 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NIPAL3Q6P499 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NIPAL3Q6P499 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NIPAL3Q6P499 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NIPAL3Q6P499 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.73■■□□□ 1.07
NIPAL3Q6P499 HSD17B1P1-201ENST00000590052 955 ntBASIC21.73■■□□□ 1.07
NIPAL3Q6P499 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NIPAL3Q6P499 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NIPAL3Q6P499 SMPD5-203ENST00000639008 1464 ntBASIC21.72■■□□□ 1.07
NIPAL3Q6P499 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
NIPAL3Q6P499 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
NIPAL3Q6P499 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NIPAL3Q6P499 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
NIPAL3Q6P499 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.71■■□□□ 1.07
NIPAL3Q6P499 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
NIPAL3Q6P499 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.71■■□□□ 1.07
NIPAL3Q6P499 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.71■■□□□ 1.07
NIPAL3Q6P499 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NIPAL3Q6P499 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
NIPAL3Q6P499 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
NIPAL3Q6P499 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
NIPAL3Q6P499 AC096887.2-201ENST00000623443 1957 ntBASIC21.7■■□□□ 1.07
NIPAL3Q6P499 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NIPAL3Q6P499 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
NIPAL3Q6P499 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NIPAL3Q6P499 AC022211.4-201ENST00000625094 2161 ntBASIC21.7■■□□□ 1.06
NIPAL3Q6P499 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.69■■□□□ 1.06
NIPAL3Q6P499 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.69■■□□□ 1.06
NIPAL3Q6P499 AC025884.2-201ENST00000553429 711 ntBASIC21.69■■□□□ 1.06
NIPAL3Q6P499 RNF126P1-201ENST00000567452 1320 ntBASIC21.69■■□□□ 1.06
NIPAL3Q6P499 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NIPAL3Q6P499 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.68■■□□□ 1.06
NIPAL3Q6P499 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.68■■□□□ 1.06
NIPAL3Q6P499 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NIPAL3Q6P499 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NIPAL3Q6P499 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
NIPAL3Q6P499 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
NIPAL3Q6P499 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
NIPAL3Q6P499 AC138932.3-201ENST00000567634 1902 ntBASIC21.68■■□□□ 1.06
NIPAL3Q6P499 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NIPAL3Q6P499 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NIPAL3Q6P499 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
NIPAL3Q6P499 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NIPAL3Q6P499 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.67■■□□□ 1.06
NIPAL3Q6P499 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.66■■□□□ 1.06
NIPAL3Q6P499 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.66■■□□□ 1.06
NIPAL3Q6P499 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms