Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
PDS5AQ29RF7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC29.19■■■□□ 2.26
PDS5AQ29RF7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC29.19■■■□□ 2.26
PDS5AQ29RF7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC29.18■■■□□ 2.26
PDS5AQ29RF7 AC103724.3-201ENST00000564481 992 ntBASIC29.18■■■□□ 2.26
PDS5AQ29RF7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
PDS5AQ29RF7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
PDS5AQ29RF7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC29.17■■■□□ 2.26
PDS5AQ29RF7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
PDS5AQ29RF7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
PDS5AQ29RF7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
PDS5AQ29RF7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
PDS5AQ29RF7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC29.16■■■□□ 2.26
PDS5AQ29RF7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC29.16■■■□□ 2.26
PDS5AQ29RF7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
PDS5AQ29RF7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
PDS5AQ29RF7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
PDS5AQ29RF7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
PDS5AQ29RF7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
PDS5AQ29RF7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC29.15■■■□□ 2.26
PDS5AQ29RF7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC29.15■■■□□ 2.26
PDS5AQ29RF7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC29.15■■■□□ 2.26
PDS5AQ29RF7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC29.14■■■□□ 2.26
PDS5AQ29RF7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC29.14■■■□□ 2.26
PDS5AQ29RF7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC29.14■■■□□ 2.26
PDS5AQ29RF7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.26
PDS5AQ29RF7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
PDS5AQ29RF7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.25
PDS5AQ29RF7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC29.14■■■□□ 2.25
PDS5AQ29RF7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC29.14■■■□□ 2.25
PDS5AQ29RF7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC29.14■■■□□ 2.25
PDS5AQ29RF7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC29.14■■■□□ 2.25
PDS5AQ29RF7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
PDS5AQ29RF7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
PDS5AQ29RF7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
PDS5AQ29RF7 AC022616.5-201ENST00000518796 181 ntBASIC29.13■■■□□ 2.25
PDS5AQ29RF7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC29.13■■■□□ 2.25
PDS5AQ29RF7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
PDS5AQ29RF7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC29.13■■■□□ 2.25
PDS5AQ29RF7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
PDS5AQ29RF7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC29.12■■■□□ 2.25
PDS5AQ29RF7 AC009299.2-201ENST00000482477 511 ntBASIC29.12■■■□□ 2.25
PDS5AQ29RF7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
PDS5AQ29RF7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
PDS5AQ29RF7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
PDS5AQ29RF7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
PDS5AQ29RF7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC29.11■■■□□ 2.25
PDS5AQ29RF7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC29.11■■■□□ 2.25
PDS5AQ29RF7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
PDS5AQ29RF7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC29.11■■■□□ 2.25
PDS5AQ29RF7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
PDS5AQ29RF7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
PDS5AQ29RF7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC29.11■■■□□ 2.25
PDS5AQ29RF7 AL031848.2-201ENST00000607670 837 ntBASIC29.09■■■□□ 2.25
PDS5AQ29RF7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
PDS5AQ29RF7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
PDS5AQ29RF7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
PDS5AQ29RF7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
PDS5AQ29RF7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
PDS5AQ29RF7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
PDS5AQ29RF7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC29.08■■■□□ 2.25
PDS5AQ29RF7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
PDS5AQ29RF7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
PDS5AQ29RF7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC29.08■■■□□ 2.25
PDS5AQ29RF7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
PDS5AQ29RF7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
PDS5AQ29RF7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
PDS5AQ29RF7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC29.07■■■□□ 2.24
PDS5AQ29RF7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC29.07■■■□□ 2.24
PDS5AQ29RF7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC29.06■■■□□ 2.24
PDS5AQ29RF7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC29.06■■■□□ 2.24
PDS5AQ29RF7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
PDS5AQ29RF7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC29.06■■■□□ 2.24
PDS5AQ29RF7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
PDS5AQ29RF7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC29.06■■■□□ 2.24
PDS5AQ29RF7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
PDS5AQ29RF7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC29.05■■■□□ 2.24
PDS5AQ29RF7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC29.05■■■□□ 2.24
PDS5AQ29RF7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC29.05■■■□□ 2.24
PDS5AQ29RF7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
PDS5AQ29RF7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC29.04■■■□□ 2.24
PDS5AQ29RF7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC29.04■■■□□ 2.24
PDS5AQ29RF7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC29.03■■■□□ 2.24
PDS5AQ29RF7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
PDS5AQ29RF7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC29.03■■■□□ 2.24
PDS5AQ29RF7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC29.03■■■□□ 2.24
PDS5AQ29RF7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
PDS5AQ29RF7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC29.01■■■□□ 2.24
PDS5AQ29RF7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.24
PDS5AQ29RF7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC29.01■■■□□ 2.23
PDS5AQ29RF7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
PDS5AQ29RF7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC29.01■■■□□ 2.23
PDS5AQ29RF7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
PDS5AQ29RF7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC29.01■■■□□ 2.23
PDS5AQ29RF7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
PDS5AQ29RF7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC29■■■□□ 2.23
PDS5AQ29RF7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC29■■■□□ 2.23
PDS5AQ29RF7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC29■■■□□ 2.23
PDS5AQ29RF7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC29■■■□□ 2.23
PDS5AQ29RF7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC29■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms