Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC31.66■■■□□ 2.66
RIPK4P57078 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC31.66■■■□□ 2.66
RIPK4P57078 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC31.66■■■□□ 2.66
RIPK4P57078 ERN1-208ENST00000606895 2068 ntBASIC31.66■■■□□ 2.66
RIPK4P57078 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
RIPK4P57078 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC31.65■■■□□ 2.66
RIPK4P57078 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC31.65■■■□□ 2.66
RIPK4P57078 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC31.65■■■□□ 2.66
RIPK4P57078 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
RIPK4P57078 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC31.64■■■□□ 2.66
RIPK4P57078 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
RIPK4P57078 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC31.64■■■□□ 2.65
RIPK4P57078 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
RIPK4P57078 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
RIPK4P57078 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC31.63■■■□□ 2.65
RIPK4P57078 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC31.63■■■□□ 2.65
RIPK4P57078 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC31.63■■■□□ 2.65
RIPK4P57078 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC31.63■■■□□ 2.65
RIPK4P57078 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
RIPK4P57078 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC31.63■■■□□ 2.65
RIPK4P57078 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
RIPK4P57078 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
RIPK4P57078 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC31.63■■■□□ 2.65
RIPK4P57078 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
RIPK4P57078 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
RIPK4P57078 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC31.61■■■□□ 2.65
RIPK4P57078 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC31.61■■■□□ 2.65
RIPK4P57078 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC31.61■■■□□ 2.65
RIPK4P57078 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC31.61■■■□□ 2.65
RIPK4P57078 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
RIPK4P57078 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
RIPK4P57078 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC31.6■■■□□ 2.65
RIPK4P57078 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
RIPK4P57078 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
RIPK4P57078 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
RIPK4P57078 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC31.6■■■□□ 2.65
RIPK4P57078 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC31.6■■■□□ 2.65
RIPK4P57078 AC092803.2-201ENST00000564287 1899 ntBASIC31.6■■■□□ 2.65
RIPK4P57078 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC31.6■■■□□ 2.65
RIPK4P57078 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
RIPK4P57078 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
RIPK4P57078 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC31.6■■■□□ 2.65
RIPK4P57078 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC31.59■■■□□ 2.65
RIPK4P57078 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
RIPK4P57078 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
RIPK4P57078 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
RIPK4P57078 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
RIPK4P57078 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
RIPK4P57078 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
RIPK4P57078 RPS2P7-201ENST00000447334 885 ntBASIC31.57■■■□□ 2.64
RIPK4P57078 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
RIPK4P57078 BHLHE23-202ENST00000612929 1109 ntBASIC31.57■■■□□ 2.64
RIPK4P57078 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
RIPK4P57078 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC31.57■■■□□ 2.64
RIPK4P57078 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
RIPK4P57078 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
RIPK4P57078 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
RIPK4P57078 AC087393.1-201ENST00000582896 145 ntBASIC31.56■■■□□ 2.64
RIPK4P57078 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
RIPK4P57078 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC31.56■■■□□ 2.64
RIPK4P57078 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
RIPK4P57078 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC31.55■■■□□ 2.64
RIPK4P57078 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC31.55■■■□□ 2.64
RIPK4P57078 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC31.55■■■□□ 2.64
RIPK4P57078 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
RIPK4P57078 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
RIPK4P57078 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC31.54■■■□□ 2.64
RIPK4P57078 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
RIPK4P57078 AC139795.1-202ENST00000500444 432 ntBASIC31.54■■■□□ 2.64
RIPK4P57078 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
RIPK4P57078 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
RIPK4P57078 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
RIPK4P57078 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
RIPK4P57078 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
RIPK4P57078 AC010980.1-201ENST00000587192 1142 ntBASIC31.53■■■□□ 2.64
RIPK4P57078 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC31.53■■■□□ 2.64
RIPK4P57078 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
RIPK4P57078 AC096887.2-201ENST00000623443 1957 ntBASIC31.52■■■□□ 2.64
RIPK4P57078 HYI-210ENST00000486909 905 ntTSL 5 BASIC31.52■■■□□ 2.64
RIPK4P57078 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC31.52■■■□□ 2.64
RIPK4P57078 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
RIPK4P57078 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
RIPK4P57078 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
RIPK4P57078 AC091060.1-201ENST00000623524 1766 ntBASIC31.51■■■□□ 2.64
RIPK4P57078 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC31.51■■■□□ 2.63
RIPK4P57078 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
RIPK4P57078 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC31.51■■■□□ 2.63
RIPK4P57078 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
RIPK4P57078 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
RIPK4P57078 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
RIPK4P57078 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC31.5■■■□□ 2.63
RIPK4P57078 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
RIPK4P57078 PVT1_1.1-201ENST00000615125 194 ntBASIC31.5■■■□□ 2.63
RIPK4P57078 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC31.5■■■□□ 2.63
RIPK4P57078 AC010501.1-201ENST00000606270 1962 ntBASIC31.5■■■□□ 2.63
RIPK4P57078 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC31.5■■■□□ 2.63
RIPK4P57078 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
RIPK4P57078 KRT18P10-201ENST00000388836 1287 ntBASIC31.49■■■□□ 2.63
RIPK4P57078 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC31.49■■■□□ 2.63
RIPK4P57078 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms