Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDH11P55287 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDH11P55287 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CDH11P55287 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDH11P55287 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.83■■□□□ 1.09
CDH11P55287 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDH11P55287 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CDH11P55287 MIR219A2-201ENST00000608502 1504 ntBASIC21.83■■□□□ 1.09
CDH11P55287 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDH11P55287 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.82■■□□□ 1.08
CDH11P55287 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDH11P55287 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDH11P55287 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDH11P55287 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.82■■□□□ 1.08
CDH11P55287 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDH11P55287 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDH11P55287 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDH11P55287 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDH11P55287 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDH11P55287 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDH11P55287 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.81■■□□□ 1.08
CDH11P55287 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.81■■□□□ 1.08
CDH11P55287 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDH11P55287 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
CDH11P55287 ABHD17AP5-201ENST00000580133 923 ntBASIC21.81■■□□□ 1.08
CDH11P55287 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.81■■□□□ 1.08
CDH11P55287 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDH11P55287 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDH11P55287 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CDH11P55287 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.8■■□□□ 1.08
CDH11P55287 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH11P55287 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CDH11P55287 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDH11P55287 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.8■■□□□ 1.08
CDH11P55287 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.8■■□□□ 1.08
CDH11P55287 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDH11P55287 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.79■■□□□ 1.08
CDH11P55287 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CDH11P55287 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.79■■□□□ 1.08
CDH11P55287 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH11P55287 AC022211.4-201ENST00000625094 2161 ntBASIC21.78■■□□□ 1.08
CDH11P55287 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDH11P55287 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CDH11P55287 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.78■■□□□ 1.08
CDH11P55287 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH11P55287 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH11P55287 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.77■■□□□ 1.08
CDH11P55287 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CDH11P55287 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH11P55287 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH11P55287 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.77■■□□□ 1.08
CDH11P55287 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDH11P55287 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.77■■□□□ 1.08
CDH11P55287 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.77■■□□□ 1.08
CDH11P55287 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.07
CDH11P55287 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
CDH11P55287 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CDH11P55287 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDH11P55287 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH11P55287 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH11P55287 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CDH11P55287 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH11P55287 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDH11P55287 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.76■■□□□ 1.07
CDH11P55287 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDH11P55287 AC138932.3-201ENST00000567634 1902 ntBASIC21.76■■□□□ 1.07
CDH11P55287 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.76■■□□□ 1.07
CDH11P55287 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH11P55287 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDH11P55287 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH11P55287 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH11P55287 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH11P55287 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
CDH11P55287 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CDH11P55287 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH11P55287 AC060814.1-201ENST00000554326 538 ntBASIC21.75■■□□□ 1.07
CDH11P55287 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH11P55287 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.75■■□□□ 1.07
CDH11P55287 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.74■■□□□ 1.07
CDH11P55287 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CDH11P55287 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH11P55287 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH11P55287 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH11P55287 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH11P55287 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.74■■□□□ 1.07
CDH11P55287 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH11P55287 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH11P55287 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH11P55287 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.73■■□□□ 1.07
CDH11P55287 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH11P55287 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
CDH11P55287 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH11P55287 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH11P55287 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CDH11P55287 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDH11P55287 AC126177.7-201ENST00000547904 679 ntBASIC21.72■■□□□ 1.07
CDH11P55287 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH11P55287 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
CDH11P55287 AL139125.2-201ENST00000623134 1869 ntBASIC21.72■■□□□ 1.07
CDH11P55287 AC096887.2-201ENST00000623443 1957 ntBASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms