Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.52■■□□□ 1.04
SDHAP31040 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SDHAP31040 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SDHAP31040 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.52■■□□□ 1.03
SDHAP31040 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SDHAP31040 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SDHAP31040 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
SDHAP31040 MIR639-201ENST00000384974 98 ntBASIC21.51■■□□□ 1.03
SDHAP31040 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SDHAP31040 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
SDHAP31040 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SDHAP31040 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SDHAP31040 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SDHAP31040 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SDHAP31040 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SDHAP31040 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.5■■□□□ 1.03
SDHAP31040 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.5■■□□□ 1.03
SDHAP31040 AC025884.2-201ENST00000553429 711 ntBASIC21.5■■□□□ 1.03
SDHAP31040 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SDHAP31040 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SDHAP31040 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SDHAP31040 AC022211.4-201ENST00000625094 2161 ntBASIC21.5■■□□□ 1.03
SDHAP31040 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SDHAP31040 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SDHAP31040 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SDHAP31040 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SDHAP31040 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SDHAP31040 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.49■■□□□ 1.03
SDHAP31040 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.49■■□□□ 1.03
SDHAP31040 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SDHAP31040 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
SDHAP31040 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.48■■□□□ 1.03
SDHAP31040 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.48■■□□□ 1.03
SDHAP31040 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SDHAP31040 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SDHAP31040 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SDHAP31040 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.47■■□□□ 1.03
SDHAP31040 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.47■■□□□ 1.03
SDHAP31040 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SDHAP31040 MIR3960-201ENST00000583311 91 ntBASIC21.47■■□□□ 1.03
SDHAP31040 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
SDHAP31040 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SDHAP31040 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SDHAP31040 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SDHAP31040 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SDHAP31040 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SDHAP31040 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
SDHAP31040 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SDHAP31040 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SDHAP31040 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.45■■□□□ 1.02
SDHAP31040 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.45■■□□□ 1.02
SDHAP31040 AC092296.2-201ENST00000589470 999 ntBASIC21.45■■□□□ 1.02
SDHAP31040 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SDHAP31040 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SDHAP31040 AC097639.1-201ENST00000565519 1891 ntBASIC21.45■■□□□ 1.02
SDHAP31040 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SDHAP31040 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SDHAP31040 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.44■■□□□ 1.02
SDHAP31040 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
SDHAP31040 SMPD5-203ENST00000639008 1464 ntBASIC21.44■■□□□ 1.02
SDHAP31040 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SDHAP31040 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.43■■□□□ 1.02
SDHAP31040 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SDHAP31040 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.43■■□□□ 1.02
SDHAP31040 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SDHAP31040 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SDHAP31040 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SDHAP31040 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SDHAP31040 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
SDHAP31040 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.42■■□□□ 1.02
SDHAP31040 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.42■■□□□ 1.02
SDHAP31040 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SDHAP31040 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SDHAP31040 AC138932.3-201ENST00000567634 1902 ntBASIC21.42■■□□□ 1.02
SDHAP31040 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.42■■□□□ 1.02
SDHAP31040 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SDHAP31040 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SDHAP31040 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.41■■□□□ 1.02
SDHAP31040 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
SDHAP31040 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SDHAP31040 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SDHAP31040 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
SDHAP31040 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SDHAP31040 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SDHAP31040 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SDHAP31040 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SDHAP31040 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.4■■□□□ 1.02
SDHAP31040 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.4■■□□□ 1.02
SDHAP31040 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SDHAP31040 AC093323.1-202ENST00000635031 2045 ntBASIC21.39■■□□□ 1.02
SDHAP31040 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SDHAP31040 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SDHAP31040 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SDHAP31040 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
SDHAP31040 ECEL1P2-201ENST00000461596 1295 ntBASIC21.39■■□□□ 1.01
SDHAP31040 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SDHAP31040 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SDHAP31040 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SDHAP31040 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SDHAP31040 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms