Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
TM4SF1P30408 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
TM4SF1P30408 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC30.52■■■□□ 2.48
TM4SF1P30408 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC30.52■■■□□ 2.48
TM4SF1P30408 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC30.52■■■□□ 2.48
TM4SF1P30408 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
TM4SF1P30408 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
TM4SF1P30408 AL139246.5-201ENST00000606645 996 ntBASIC30.51■■■□□ 2.47
TM4SF1P30408 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.47
TM4SF1P30408 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
TM4SF1P30408 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
TM4SF1P30408 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
TM4SF1P30408 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC30.5■■■□□ 2.47
TM4SF1P30408 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
TM4SF1P30408 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
TM4SF1P30408 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
TM4SF1P30408 AC120024.1-201ENST00000562672 995 ntBASIC30.49■■■□□ 2.47
TM4SF1P30408 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
TM4SF1P30408 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
TM4SF1P30408 TSPY9P-201ENST00000440215 945 ntBASIC30.48■■■□□ 2.47
TM4SF1P30408 TSPY11P-201ENST00000442607 1045 ntBASIC30.48■■■□□ 2.47
TM4SF1P30408 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC30.48■■■□□ 2.47
TM4SF1P30408 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
TM4SF1P30408 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
TM4SF1P30408 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
TM4SF1P30408 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC30.47■■■□□ 2.47
TM4SF1P30408 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC30.47■■■□□ 2.47
TM4SF1P30408 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC30.47■■■□□ 2.47
TM4SF1P30408 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC30.47■■■□□ 2.47
TM4SF1P30408 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
TM4SF1P30408 AC092028.1-203ENST00000608262 953 ntBASIC30.46■■■□□ 2.47
TM4SF1P30408 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
TM4SF1P30408 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC30.45■■■□□ 2.47
TM4SF1P30408 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC30.45■■■□□ 2.47
TM4SF1P30408 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC30.45■■■□□ 2.47
TM4SF1P30408 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
TM4SF1P30408 AC131281.2-201ENST00000520478 145 ntBASIC30.45■■■□□ 2.47
TM4SF1P30408 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC30.44■■■□□ 2.46
TM4SF1P30408 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC30.44■■■□□ 2.46
TM4SF1P30408 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC30.44■■■□□ 2.46
TM4SF1P30408 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
TM4SF1P30408 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
TM4SF1P30408 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
TM4SF1P30408 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC30.43■■■□□ 2.46
TM4SF1P30408 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
TM4SF1P30408 NALT1-201ENST00000429224 738 ntTSL 5 BASIC30.43■■■□□ 2.46
TM4SF1P30408 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC30.43■■■□□ 2.46
TM4SF1P30408 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
TM4SF1P30408 RALB-208ENST00000631312 311 ntTSL 5 BASIC30.43■■■□□ 2.46
TM4SF1P30408 AL449106.1-201ENST00000608517 1980 ntBASIC30.43■■■□□ 2.46
TM4SF1P30408 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
TM4SF1P30408 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC30.42■■■□□ 2.46
TM4SF1P30408 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
TM4SF1P30408 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC30.42■■■□□ 2.46
TM4SF1P30408 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
TM4SF1P30408 RPP21-222ENST00000433076 577 ntTSL 2 BASIC30.41■■■□□ 2.46
TM4SF1P30408 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC30.41■■■□□ 2.46
TM4SF1P30408 TRIR-202ENST00000588213 841 ntTSL 3 BASIC30.41■■■□□ 2.46
TM4SF1P30408 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC30.41■■■□□ 2.46
TM4SF1P30408 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC30.41■■■□□ 2.46
TM4SF1P30408 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC30.41■■■□□ 2.46
TM4SF1P30408 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
TM4SF1P30408 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC30.4■■■□□ 2.46
TM4SF1P30408 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC30.4■■■□□ 2.46
TM4SF1P30408 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC30.4■■■□□ 2.46
TM4SF1P30408 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
TM4SF1P30408 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.4■■■□□ 2.46
TM4SF1P30408 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.4■■■□□ 2.46
TM4SF1P30408 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
TM4SF1P30408 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.46
TM4SF1P30408 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC30.39■■■□□ 2.46
TM4SF1P30408 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC30.39■■■□□ 2.46
TM4SF1P30408 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
TM4SF1P30408 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
TM4SF1P30408 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.38■■■□□ 2.45
TM4SF1P30408 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.37■■■□□ 2.45
TM4SF1P30408 SRR-208ENST00000576848 588 ntTSL 4 BASIC30.37■■■□□ 2.45
TM4SF1P30408 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC30.37■■■□□ 2.45
TM4SF1P30408 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC30.37■■■□□ 2.45
TM4SF1P30408 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC30.36■■■□□ 2.45
TM4SF1P30408 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
TM4SF1P30408 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
TM4SF1P30408 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
TM4SF1P30408 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
TM4SF1P30408 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
TM4SF1P30408 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
TM4SF1P30408 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
TM4SF1P30408 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
TM4SF1P30408 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
TM4SF1P30408 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC30.34■■■□□ 2.45
TM4SF1P30408 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
TM4SF1P30408 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC30.33■■■□□ 2.45
TM4SF1P30408 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC30.33■■■□□ 2.45
TM4SF1P30408 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
TM4SF1P30408 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC30.32■■■□□ 2.44
TM4SF1P30408 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC30.32■■■□□ 2.44
TM4SF1P30408 AL136116.3-201ENST00000402907 1138 ntBASIC30.32■■■□□ 2.44
TM4SF1P30408 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC30.32■■■□□ 2.44
TM4SF1P30408 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC30.32■■■□□ 2.44
TM4SF1P30408 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC30.32■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms