Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
HLA-DPB1P04440 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DPB1P04440 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
HLA-DPB1P04440 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.03
HLA-DPB1P04440 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DPB1P04440 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DPB1P04440 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DPB1P04440 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.45■■□□□ 1.02
HLA-DPB1P04440 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.45■■□□□ 1.02
HLA-DPB1P04440 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DPB1P04440 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DPB1P04440 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DPB1P04440 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
HLA-DPB1P04440 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DPB1P04440 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DPB1P04440 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.44■■□□□ 1.02
HLA-DPB1P04440 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.44■■□□□ 1.02
HLA-DPB1P04440 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DPB1P04440 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.43■■□□□ 1.02
HLA-DPB1P04440 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.43■■□□□ 1.02
HLA-DPB1P04440 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DPB1P04440 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DPB1P04440 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DPB1P04440 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DPB1P04440 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DPB1P04440 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.43■■□□□ 1.02
HLA-DPB1P04440 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DPB1P04440 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DPB1P04440 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DPB1P04440 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DPB1P04440 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.42■■□□□ 1.02
HLA-DPB1P04440 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DPB1P04440 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
HLA-DPB1P04440 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.42■■□□□ 1.02
HLA-DPB1P04440 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.42■■□□□ 1.02
HLA-DPB1P04440 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DPB1P04440 HLA-V-202ENST00000446817 847 ntBASIC21.41■■□□□ 1.02
HLA-DPB1P04440 AC008813.1-201ENST00000536597 885 ntBASIC21.41■■□□□ 1.02
HLA-DPB1P04440 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DPB1P04440 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DPB1P04440 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.41■■□□□ 1.02
HLA-DPB1P04440 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.4■■□□□ 1.02
HLA-DPB1P04440 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DPB1P04440 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DPB1P04440 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DPB1P04440 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.4■■□□□ 1.02
HLA-DPB1P04440 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DPB1P04440 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
HLA-DPB1P04440 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
HLA-DPB1P04440 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
HLA-DPB1P04440 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HLA-DPB1P04440 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HLA-DPB1P04440 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
HLA-DPB1P04440 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DPB1P04440 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DPB1P04440 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
HLA-DPB1P04440 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.38■■□□□ 1.01
HLA-DPB1P04440 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DPB1P04440 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HLA-DPB1P04440 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HLA-DPB1P04440 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HLA-DPB1P04440 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HLA-DPB1P04440 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
HLA-DPB1P04440 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.37■■□□□ 1.01
HLA-DPB1P04440 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HLA-DPB1P04440 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HLA-DPB1P04440 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
HLA-DPB1P04440 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.36■■□□□ 1.01
HLA-DPB1P04440 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.36■■□□□ 1.01
HLA-DPB1P04440 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DPB1P04440 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
HLA-DPB1P04440 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.36■■□□□ 1.01
HLA-DPB1P04440 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DPB1P04440 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.36■■□□□ 1.01
HLA-DPB1P04440 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DPB1P04440 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DPB1P04440 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DPB1P04440 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
HLA-DPB1P04440 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.35■■□□□ 1.01
HLA-DPB1P04440 MIR219A2-201ENST00000608502 1504 ntBASIC21.34■■□□□ 1.01
HLA-DPB1P04440 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HLA-DPB1P04440 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HLA-DPB1P04440 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HLA-DPB1P04440 MIR639-201ENST00000384974 98 ntBASIC21.34■■□□□ 1.01
HLA-DPB1P04440 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.34■■□□□ 1.01
HLA-DPB1P04440 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
HLA-DPB1P04440 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HLA-DPB1P04440 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.33■■□□□ 1.01
HLA-DPB1P04440 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.33■■□□□ 1.01
HLA-DPB1P04440 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
HLA-DPB1P04440 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HLA-DPB1P04440 AC012676.1-201ENST00000574705 1949 ntBASIC21.32■■□□□ 1
HLA-DPB1P04440 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HLA-DPB1P04440 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HLA-DPB1P04440 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HLA-DPB1P04440 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HLA-DPB1P04440 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.32■■□□□ 1
HLA-DPB1P04440 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.32■■□□□ 1
HLA-DPB1P04440 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.31■■□□□ 1
HLA-DPB1P04440 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms