Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.07■□□□□ 0.96
APOC1P02654 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.07■□□□□ 0.96
APOC1P02654 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.07■□□□□ 0.96
APOC1P02654 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.07■□□□□ 0.96
APOC1P02654 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.07■□□□□ 0.96
APOC1P02654 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.07■□□□□ 0.96
APOC1P02654 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
APOC1P02654 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
APOC1P02654 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
APOC1P02654 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
APOC1P02654 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.06■□□□□ 0.96
APOC1P02654 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
APOC1P02654 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
APOC1P02654 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
APOC1P02654 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.06■□□□□ 0.96
APOC1P02654 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.06■□□□□ 0.96
APOC1P02654 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.05■□□□□ 0.96
APOC1P02654 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.05■□□□□ 0.96
APOC1P02654 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
APOC1P02654 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.05■□□□□ 0.96
APOC1P02654 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
APOC1P02654 AC020928.2-201ENST00000588717 2197 ntBASIC21.04■□□□□ 0.96
APOC1P02654 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
APOC1P02654 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.04■□□□□ 0.96
APOC1P02654 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
APOC1P02654 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
APOC1P02654 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
APOC1P02654 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
APOC1P02654 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
APOC1P02654 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.04■□□□□ 0.96
APOC1P02654 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
APOC1P02654 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
APOC1P02654 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
APOC1P02654 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
APOC1P02654 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
APOC1P02654 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
APOC1P02654 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
APOC1P02654 AC060814.1-201ENST00000554326 538 ntBASIC21.03■□□□□ 0.96
APOC1P02654 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.03■□□□□ 0.96
APOC1P02654 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.02■□□□□ 0.96
APOC1P02654 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
APOC1P02654 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
APOC1P02654 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
APOC1P02654 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.02■□□□□ 0.96
APOC1P02654 MIR3960-201ENST00000583311 91 ntBASIC21.02■□□□□ 0.96
APOC1P02654 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
APOC1P02654 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.02■□□□□ 0.96
APOC1P02654 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
APOC1P02654 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
APOC1P02654 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
APOC1P02654 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
APOC1P02654 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
APOC1P02654 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
APOC1P02654 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.01■□□□□ 0.95
APOC1P02654 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
APOC1P02654 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
APOC1P02654 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
APOC1P02654 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21■□□□□ 0.95
APOC1P02654 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
APOC1P02654 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
APOC1P02654 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
APOC1P02654 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
APOC1P02654 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
APOC1P02654 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
APOC1P02654 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
APOC1P02654 AC025884.2-201ENST00000553429 711 ntBASIC20.99■□□□□ 0.95
APOC1P02654 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.99■□□□□ 0.95
APOC1P02654 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
APOC1P02654 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
APOC1P02654 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.99■□□□□ 0.95
APOC1P02654 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
APOC1P02654 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.99■□□□□ 0.95
APOC1P02654 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.99■□□□□ 0.95
APOC1P02654 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
APOC1P02654 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.98■□□□□ 0.95
APOC1P02654 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
APOC1P02654 AL157400.5-201ENST00000507624 621 ntBASIC20.98■□□□□ 0.95
APOC1P02654 SMPD5-203ENST00000639008 1464 ntBASIC20.98■□□□□ 0.95
APOC1P02654 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
APOC1P02654 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.97■□□□□ 0.95
APOC1P02654 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
APOC1P02654 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
APOC1P02654 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
APOC1P02654 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
APOC1P02654 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.97■□□□□ 0.95
APOC1P02654 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
APOC1P02654 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
APOC1P02654 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
APOC1P02654 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.96■□□□□ 0.95
APOC1P02654 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
APOC1P02654 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.96■□□□□ 0.95
APOC1P02654 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
APOC1P02654 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
APOC1P02654 ECEL1P2-201ENST00000461596 1295 ntBASIC20.96■□□□□ 0.95
APOC1P02654 AC092296.2-201ENST00000589470 999 ntBASIC20.96■□□□□ 0.95
APOC1P02654 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.96■□□□□ 0.95
APOC1P02654 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
APOC1P02654 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
APOC1P02654 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
APOC1P02654 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms