Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PPP1R3DO95685 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PPP1R3DO95685 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PPP1R3DO95685 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.65■■□□□ 1.06
PPP1R3DO95685 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PPP1R3DO95685 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PPP1R3DO95685 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PPP1R3DO95685 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.64■■□□□ 1.05
PPP1R3DO95685 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.64■■□□□ 1.05
PPP1R3DO95685 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PPP1R3DO95685 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PPP1R3DO95685 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.64■■□□□ 1.05
PPP1R3DO95685 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
PPP1R3DO95685 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PPP1R3DO95685 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.63■■□□□ 1.05
PPP1R3DO95685 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PPP1R3DO95685 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.62■■□□□ 1.05
PPP1R3DO95685 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PPP1R3DO95685 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
PPP1R3DO95685 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PPP1R3DO95685 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PPP1R3DO95685 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PPP1R3DO95685 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.61■■□□□ 1.05
PPP1R3DO95685 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PPP1R3DO95685 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PPP1R3DO95685 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PPP1R3DO95685 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PPP1R3DO95685 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.6■■□□□ 1.05
PPP1R3DO95685 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PPP1R3DO95685 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.6■■□□□ 1.05
PPP1R3DO95685 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
PPP1R3DO95685 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPP1R3DO95685 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
PPP1R3DO95685 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPP1R3DO95685 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.59■■□□□ 1.05
PPP1R3DO95685 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PPP1R3DO95685 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PPP1R3DO95685 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PPP1R3DO95685 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.59■■□□□ 1.05
PPP1R3DO95685 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
PPP1R3DO95685 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PPP1R3DO95685 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PPP1R3DO95685 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.58■■□□□ 1.05
PPP1R3DO95685 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.58■■□□□ 1.05
PPP1R3DO95685 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PPP1R3DO95685 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.58■■□□□ 1.04
PPP1R3DO95685 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.58■■□□□ 1.04
PPP1R3DO95685 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
PPP1R3DO95685 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PPP1R3DO95685 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
PPP1R3DO95685 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PPP1R3DO95685 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
PPP1R3DO95685 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPP1R3DO95685 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PPP1R3DO95685 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PPP1R3DO95685 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.57■■□□□ 1.04
PPP1R3DO95685 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PPP1R3DO95685 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PPP1R3DO95685 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PPP1R3DO95685 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PPP1R3DO95685 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PPP1R3DO95685 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PPP1R3DO95685 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PPP1R3DO95685 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PPP1R3DO95685 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PPP1R3DO95685 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PPP1R3DO95685 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.55■■□□□ 1.04
PPP1R3DO95685 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PPP1R3DO95685 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.55■■□□□ 1.04
PPP1R3DO95685 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PPP1R3DO95685 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
PPP1R3DO95685 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.55■■□□□ 1.04
PPP1R3DO95685 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PPP1R3DO95685 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PPP1R3DO95685 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PPP1R3DO95685 AL139125.2-201ENST00000623134 1869 ntBASIC21.54■■□□□ 1.04
PPP1R3DO95685 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
PPP1R3DO95685 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PPP1R3DO95685 AL157400.5-201ENST00000507624 621 ntBASIC21.54■■□□□ 1.04
PPP1R3DO95685 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PPP1R3DO95685 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PPP1R3DO95685 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PPP1R3DO95685 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPP1R3DO95685 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PPP1R3DO95685 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PPP1R3DO95685 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PPP1R3DO95685 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.53■■□□□ 1.04
PPP1R3DO95685 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PPP1R3DO95685 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPP1R3DO95685 AC097639.1-201ENST00000565519 1891 ntBASIC21.53■■□□□ 1.04
PPP1R3DO95685 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PPP1R3DO95685 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPP1R3DO95685 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPP1R3DO95685 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PPP1R3DO95685 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PPP1R3DO95685 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PPP1R3DO95685 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.52■■□□□ 1.04
PPP1R3DO95685 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PPP1R3DO95685 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PPP1R3DO95685 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms