Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
BEST1O76090 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
BEST1O76090 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC25.44■■□□□ 1.66
BEST1O76090 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.43■■□□□ 1.66
BEST1O76090 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
BEST1O76090 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC25.43■■□□□ 1.66
BEST1O76090 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
BEST1O76090 IDNK-203ENST00000405990 629 ntTSL 2 BASIC25.43■■□□□ 1.66
BEST1O76090 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
BEST1O76090 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.42■■□□□ 1.66
BEST1O76090 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
BEST1O76090 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
BEST1O76090 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.41■■□□□ 1.66
BEST1O76090 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
BEST1O76090 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
BEST1O76090 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
BEST1O76090 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
BEST1O76090 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.4■■□□□ 1.66
BEST1O76090 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.4■■□□□ 1.66
BEST1O76090 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.4■■□□□ 1.66
BEST1O76090 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
BEST1O76090 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC25.4■■□□□ 1.66
BEST1O76090 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.4■■□□□ 1.66
BEST1O76090 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.4■■□□□ 1.66
BEST1O76090 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.4■■□□□ 1.66
BEST1O76090 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
BEST1O76090 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
BEST1O76090 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
BEST1O76090 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.39■■□□□ 1.66
BEST1O76090 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.39■■□□□ 1.66
BEST1O76090 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
BEST1O76090 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
BEST1O76090 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
BEST1O76090 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
BEST1O76090 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC25.39■■□□□ 1.66
BEST1O76090 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
BEST1O76090 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.39■■□□□ 1.65
BEST1O76090 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC25.38■■□□□ 1.65
BEST1O76090 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
BEST1O76090 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
BEST1O76090 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
BEST1O76090 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
BEST1O76090 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
BEST1O76090 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
BEST1O76090 AC092803.2-201ENST00000564287 1899 ntBASIC25.37■■□□□ 1.65
BEST1O76090 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
BEST1O76090 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
BEST1O76090 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
BEST1O76090 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.36■■□□□ 1.65
BEST1O76090 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.36■■□□□ 1.65
BEST1O76090 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
BEST1O76090 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
BEST1O76090 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
BEST1O76090 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
BEST1O76090 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
BEST1O76090 RPS2P7-201ENST00000447334 885 ntBASIC25.35■■□□□ 1.65
BEST1O76090 AC010980.1-201ENST00000587192 1142 ntBASIC25.35■■□□□ 1.65
BEST1O76090 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.35■■□□□ 1.65
BEST1O76090 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
BEST1O76090 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
BEST1O76090 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.34■■□□□ 1.65
BEST1O76090 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
BEST1O76090 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
BEST1O76090 AC087393.1-201ENST00000582896 145 ntBASIC25.34■■□□□ 1.65
BEST1O76090 BHLHE23-202ENST00000612929 1109 ntBASIC25.34■■□□□ 1.65
BEST1O76090 PVT1_1.1-201ENST00000615125 194 ntBASIC25.34■■□□□ 1.65
BEST1O76090 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
BEST1O76090 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
BEST1O76090 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
BEST1O76090 AC096887.2-201ENST00000623443 1957 ntBASIC25.33■■□□□ 1.65
BEST1O76090 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
BEST1O76090 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
BEST1O76090 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC25.33■■□□□ 1.65
BEST1O76090 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC25.33■■□□□ 1.65
BEST1O76090 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.65
BEST1O76090 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.32■■□□□ 1.64
BEST1O76090 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.32■■□□□ 1.64
BEST1O76090 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
BEST1O76090 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
BEST1O76090 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
BEST1O76090 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
BEST1O76090 AC139795.1-202ENST00000500444 432 ntBASIC25.32■■□□□ 1.64
BEST1O76090 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
BEST1O76090 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
BEST1O76090 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.31■■□□□ 1.64
BEST1O76090 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
BEST1O76090 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
BEST1O76090 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
BEST1O76090 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
BEST1O76090 AC091060.1-201ENST00000623524 1766 ntBASIC25.31■■□□□ 1.64
BEST1O76090 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.3■■□□□ 1.64
BEST1O76090 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
BEST1O76090 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.3■■□□□ 1.64
BEST1O76090 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.3■■□□□ 1.64
BEST1O76090 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
BEST1O76090 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
BEST1O76090 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
BEST1O76090 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.3■■□□□ 1.64
BEST1O76090 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.29■■□□□ 1.64
BEST1O76090 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms