Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDCD6O75340 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDCD6O75340 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDCD6O75340 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.24■□□□□ 0.83
PDCD6O75340 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDCD6O75340 ABHD17AP4-201ENST00000411545 909 ntBASIC20.24■□□□□ 0.83
PDCD6O75340 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.24■□□□□ 0.83
PDCD6O75340 MIR3648-2-201ENST00000581792 180 ntBASIC20.24■□□□□ 0.83
PDCD6O75340 MIR3648-1-201ENST00000615959 180 ntBASIC20.24■□□□□ 0.83
PDCD6O75340 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.24■□□□□ 0.83
PDCD6O75340 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDCD6O75340 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDCD6O75340 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.24■□□□□ 0.83
PDCD6O75340 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDCD6O75340 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDCD6O75340 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDCD6O75340 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDCD6O75340 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDCD6O75340 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PDCD6O75340 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDCD6O75340 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDCD6O75340 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDCD6O75340 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PDCD6O75340 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDCD6O75340 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDCD6O75340 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDCD6O75340 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDCD6O75340 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDCD6O75340 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.21■□□□□ 0.83
PDCD6O75340 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.21■□□□□ 0.83
PDCD6O75340 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDCD6O75340 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDCD6O75340 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDCD6O75340 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDCD6O75340 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.2■□□□□ 0.82
PDCD6O75340 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDCD6O75340 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDCD6O75340 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDCD6O75340 AL139125.2-201ENST00000623134 1869 ntBASIC20.2■□□□□ 0.82
PDCD6O75340 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDCD6O75340 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PDCD6O75340 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDCD6O75340 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDCD6O75340 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDCD6O75340 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.19■□□□□ 0.82
PDCD6O75340 AC097639.1-201ENST00000565519 1891 ntBASIC20.19■□□□□ 0.82
PDCD6O75340 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.19■□□□□ 0.82
PDCD6O75340 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
PDCD6O75340 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDCD6O75340 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDCD6O75340 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.17■□□□□ 0.82
PDCD6O75340 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDCD6O75340 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDCD6O75340 AC016575.1-201ENST00000607026 382 ntBASIC20.17■□□□□ 0.82
PDCD6O75340 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDCD6O75340 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDCD6O75340 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDCD6O75340 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDCD6O75340 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDCD6O75340 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PDCD6O75340 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PDCD6O75340 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDCD6O75340 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.16■□□□□ 0.82
PDCD6O75340 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDCD6O75340 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDCD6O75340 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDCD6O75340 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDCD6O75340 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.16■□□□□ 0.82
PDCD6O75340 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
PDCD6O75340 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDCD6O75340 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDCD6O75340 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDCD6O75340 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
PDCD6O75340 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PDCD6O75340 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDCD6O75340 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.15■□□□□ 0.82
PDCD6O75340 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.15■□□□□ 0.82
PDCD6O75340 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PDCD6O75340 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.14■□□□□ 0.82
PDCD6O75340 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.14■□□□□ 0.81
PDCD6O75340 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PDCD6O75340 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PDCD6O75340 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PDCD6O75340 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
PDCD6O75340 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.14■□□□□ 0.81
PDCD6O75340 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PDCD6O75340 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDCD6O75340 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDCD6O75340 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDCD6O75340 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.13■□□□□ 0.81
PDCD6O75340 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
PDCD6O75340 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDCD6O75340 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
PDCD6O75340 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDCD6O75340 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PDCD6O75340 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PDCD6O75340 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDCD6O75340 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDCD6O75340 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.12■□□□□ 0.81
PDCD6O75340 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms