Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NDUFA1O15239 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NDUFA1O15239 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFA1O15239 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFA1O15239 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFA1O15239 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFA1O15239 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFA1O15239 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFA1O15239 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFA1O15239 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NDUFA1O15239 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFA1O15239 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFA1O15239 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFA1O15239 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFA1O15239 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC16.31■□□□□ 0.2
NDUFA1O15239 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFA1O15239 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFA1O15239 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFA1O15239 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFA1O15239 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
NDUFA1O15239 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC16.3■□□□□ 0.2
NDUFA1O15239 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC16.3■□□□□ 0.2
NDUFA1O15239 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFA1O15239 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC16.3■□□□□ 0.2
NDUFA1O15239 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC16.3■□□□□ 0.2
NDUFA1O15239 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NDUFA1O15239 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.29■□□□□ 0.2
NDUFA1O15239 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFA1O15239 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFA1O15239 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFA1O15239 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFA1O15239 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDUFA1O15239 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDUFA1O15239 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NDUFA1O15239 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC16.28■□□□□ 0.2
NDUFA1O15239 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
NDUFA1O15239 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC16.28■□□□□ 0.2
NDUFA1O15239 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDUFA1O15239 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDUFA1O15239 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC16.28■□□□□ 0.2
NDUFA1O15239 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDUFA1O15239 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NDUFA1O15239 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
NDUFA1O15239 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NDUFA1O15239 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDUFA1O15239 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
NDUFA1O15239 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NDUFA1O15239 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NDUFA1O15239 AC068473.5-201ENST00000616428 2072 ntBASIC16.27■□□□□ 0.2
NDUFA1O15239 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC16.27■□□□□ 0.2
NDUFA1O15239 RPS2-210ENST00000530225 765 ntTSL 2 BASIC16.27■□□□□ 0.2
NDUFA1O15239 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC16.27■□□□□ 0.2
NDUFA1O15239 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NDUFA1O15239 EED-207ENST00000528180 1745 ntTSL 5 BASIC16.27■□□□□ 0.19
NDUFA1O15239 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NDUFA1O15239 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NDUFA1O15239 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NDUFA1O15239 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NDUFA1O15239 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NDUFA1O15239 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDUFA1O15239 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDUFA1O15239 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NDUFA1O15239 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
NDUFA1O15239 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NDUFA1O15239 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NDUFA1O15239 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDUFA1O15239 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDUFA1O15239 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NDUFA1O15239 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NDUFA1O15239 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDUFA1O15239 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDUFA1O15239 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC16.25■□□□□ 0.19
NDUFA1O15239 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDUFA1O15239 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NDUFA1O15239 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDUFA1O15239 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDUFA1O15239 LINC01124-201ENST00000409786 2117 ntBASIC16.25■□□□□ 0.19
NDUFA1O15239 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NDUFA1O15239 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NDUFA1O15239 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NDUFA1O15239 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NDUFA1O15239 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NDUFA1O15239 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NDUFA1O15239 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC16.24■□□□□ 0.19
NDUFA1O15239 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC16.24■□□□□ 0.19
NDUFA1O15239 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NDUFA1O15239 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
NDUFA1O15239 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
NDUFA1O15239 LINC00543-201ENST00000567234 1845 ntBASIC16.24■□□□□ 0.19
NDUFA1O15239 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NDUFA1O15239 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NDUFA1O15239 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC16.23■□□□□ 0.19
NDUFA1O15239 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFA1O15239 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFA1O15239 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFA1O15239 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC16.23■□□□□ 0.19
NDUFA1O15239 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC16.23■□□□□ 0.19
NDUFA1O15239 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFA1O15239 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFA1O15239 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms