Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
AP3D1O14617 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
AP3D1O14617 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
AP3D1O14617 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
AP3D1O14617 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
AP3D1O14617 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.3■■□□□ 1.16
AP3D1O14617 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.3■■□□□ 1.16
AP3D1O14617 AC060814.1-201ENST00000554326 538 ntBASIC22.3■■□□□ 1.16
AP3D1O14617 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
AP3D1O14617 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
AP3D1O14617 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.29■■□□□ 1.16
AP3D1O14617 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
AP3D1O14617 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
AP3D1O14617 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
AP3D1O14617 AC093323.1-202ENST00000635031 2045 ntBASIC22.29■■□□□ 1.16
AP3D1O14617 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
AP3D1O14617 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
AP3D1O14617 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
AP3D1O14617 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
AP3D1O14617 AL157400.5-201ENST00000507624 621 ntBASIC22.28■■□□□ 1.16
AP3D1O14617 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.28■■□□□ 1.16
AP3D1O14617 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.28■■□□□ 1.16
AP3D1O14617 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
AP3D1O14617 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
AP3D1O14617 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
AP3D1O14617 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
AP3D1O14617 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
AP3D1O14617 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
AP3D1O14617 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
AP3D1O14617 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
AP3D1O14617 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
AP3D1O14617 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
AP3D1O14617 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
AP3D1O14617 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
AP3D1O14617 MIR4449-201ENST00000578365 66 ntBASIC22.26■■□□□ 1.15
AP3D1O14617 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
AP3D1O14617 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
AP3D1O14617 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
AP3D1O14617 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC22.25■■□□□ 1.15
AP3D1O14617 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.25■■□□□ 1.15
AP3D1O14617 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.25■■□□□ 1.15
AP3D1O14617 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
AP3D1O14617 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
AP3D1O14617 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
AP3D1O14617 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
AP3D1O14617 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.24■■□□□ 1.15
AP3D1O14617 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
AP3D1O14617 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
AP3D1O14617 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
AP3D1O14617 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
AP3D1O14617 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
AP3D1O14617 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
AP3D1O14617 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
AP3D1O14617 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
AP3D1O14617 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
AP3D1O14617 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
AP3D1O14617 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.23■■□□□ 1.15
AP3D1O14617 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.23■■□□□ 1.15
AP3D1O14617 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.23■■□□□ 1.15
AP3D1O14617 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
AP3D1O14617 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
AP3D1O14617 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.22■■□□□ 1.15
AP3D1O14617 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
AP3D1O14617 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
AP3D1O14617 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.22■■□□□ 1.15
AP3D1O14617 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
AP3D1O14617 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
AP3D1O14617 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
AP3D1O14617 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
AP3D1O14617 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.21■■□□□ 1.15
AP3D1O14617 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
AP3D1O14617 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
AP3D1O14617 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.2■■□□□ 1.15
AP3D1O14617 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
AP3D1O14617 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
AP3D1O14617 AC022413.1-201ENST00000624602 984 ntBASIC22.2■■□□□ 1.14
AP3D1O14617 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.2■■□□□ 1.14
AP3D1O14617 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
AP3D1O14617 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
AP3D1O14617 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
AP3D1O14617 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
AP3D1O14617 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
AP3D1O14617 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.19■■□□□ 1.14
AP3D1O14617 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.19■■□□□ 1.14
AP3D1O14617 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.19■■□□□ 1.14
AP3D1O14617 AC092296.2-201ENST00000589470 999 ntBASIC22.19■■□□□ 1.14
AP3D1O14617 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.19■■□□□ 1.14
AP3D1O14617 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
AP3D1O14617 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
AP3D1O14617 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.19■■□□□ 1.14
AP3D1O14617 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
AP3D1O14617 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
AP3D1O14617 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.18■■□□□ 1.14
AP3D1O14617 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.17■■□□□ 1.14
AP3D1O14617 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
AP3D1O14617 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
AP3D1O14617 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
AP3D1O14617 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
AP3D1O14617 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.17■■□□□ 1.14
AP3D1O14617 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms