Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
SBNO1A3KN83 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC33.22■■■□□ 2.91
SBNO1A3KN83 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
SBNO1A3KN83 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC33.21■■■□□ 2.91
SBNO1A3KN83 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC33.21■■■□□ 2.91
SBNO1A3KN83 AL139246.5-201ENST00000606645 996 ntBASIC33.21■■■□□ 2.91
SBNO1A3KN83 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
SBNO1A3KN83 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC33.2■■■□□ 2.91
SBNO1A3KN83 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC33.2■■■□□ 2.9
SBNO1A3KN83 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC33.19■■■□□ 2.9
SBNO1A3KN83 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC33.19■■■□□ 2.9
SBNO1A3KN83 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC33.19■■■□□ 2.9
SBNO1A3KN83 AC131281.2-201ENST00000520478 145 ntBASIC33.19■■■□□ 2.9
SBNO1A3KN83 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC33.19■■■□□ 2.9
SBNO1A3KN83 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
SBNO1A3KN83 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC33.18■■■□□ 2.9
SBNO1A3KN83 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
SBNO1A3KN83 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
SBNO1A3KN83 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
SBNO1A3KN83 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
SBNO1A3KN83 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
SBNO1A3KN83 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC33.16■■■□□ 2.9
SBNO1A3KN83 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
SBNO1A3KN83 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
SBNO1A3KN83 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC33.15■■■□□ 2.9
SBNO1A3KN83 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
SBNO1A3KN83 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC33.15■■■□□ 2.9
SBNO1A3KN83 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
SBNO1A3KN83 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC33.15■■■□□ 2.9
SBNO1A3KN83 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC33.14■■■□□ 2.9
SBNO1A3KN83 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
SBNO1A3KN83 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC33.13■■■□□ 2.89
SBNO1A3KN83 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
SBNO1A3KN83 TSPY9P-201ENST00000440215 945 ntBASIC33.13■■■□□ 2.89
SBNO1A3KN83 TSPY11P-201ENST00000442607 1045 ntBASIC33.13■■■□□ 2.89
SBNO1A3KN83 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC33.13■■■□□ 2.89
SBNO1A3KN83 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC33.13■■■□□ 2.89
SBNO1A3KN83 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC33.12■■■□□ 2.89
SBNO1A3KN83 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC33.12■■■□□ 2.89
SBNO1A3KN83 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
SBNO1A3KN83 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC33.12■■■□□ 2.89
SBNO1A3KN83 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
SBNO1A3KN83 AC120024.1-201ENST00000562672 995 ntBASIC33.12■■■□□ 2.89
SBNO1A3KN83 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC33.12■■■□□ 2.89
SBNO1A3KN83 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
SBNO1A3KN83 DRD5P2-201ENST00000421395 2012 ntBASIC33.12■■■□□ 2.89
SBNO1A3KN83 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC33.11■■■□□ 2.89
SBNO1A3KN83 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC33.11■■■□□ 2.89
SBNO1A3KN83 RALB-208ENST00000631312 311 ntTSL 5 BASIC33.11■■■□□ 2.89
SBNO1A3KN83 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC33.11■■■□□ 2.89
SBNO1A3KN83 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC33.1■■■□□ 2.89
SBNO1A3KN83 NALT1-201ENST00000429224 738 ntTSL 5 BASIC33.1■■■□□ 2.89
SBNO1A3KN83 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC33.1■■■□□ 2.89
SBNO1A3KN83 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC33.1■■■□□ 2.89
SBNO1A3KN83 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
SBNO1A3KN83 TRIR-202ENST00000588213 841 ntTSL 3 BASIC33.1■■■□□ 2.89
SBNO1A3KN83 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC33.1■■■□□ 2.89
SBNO1A3KN83 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
SBNO1A3KN83 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC33.09■■■□□ 2.89
SBNO1A3KN83 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
SBNO1A3KN83 RPP21-222ENST00000433076 577 ntTSL 2 BASIC33.09■■■□□ 2.89
SBNO1A3KN83 AC092028.1-203ENST00000608262 953 ntBASIC33.09■■■□□ 2.89
SBNO1A3KN83 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC33.09■■■□□ 2.89
SBNO1A3KN83 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC33.09■■■□□ 2.89
SBNO1A3KN83 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
SBNO1A3KN83 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC33.08■■■□□ 2.89
SBNO1A3KN83 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC33.08■■■□□ 2.89
SBNO1A3KN83 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
SBNO1A3KN83 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC33.07■■■□□ 2.88
SBNO1A3KN83 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC33.07■■■□□ 2.88
SBNO1A3KN83 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC33.06■■■□□ 2.88
SBNO1A3KN83 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
SBNO1A3KN83 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC33.05■■■□□ 2.88
SBNO1A3KN83 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC33.05■■■□□ 2.88
SBNO1A3KN83 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
SBNO1A3KN83 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC33.03■■■□□ 2.88
SBNO1A3KN83 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC33.03■■■□□ 2.88
SBNO1A3KN83 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC33.02■■■□□ 2.88
SBNO1A3KN83 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC33.02■■■□□ 2.88
SBNO1A3KN83 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC33.02■■■□□ 2.88
SBNO1A3KN83 SRR-208ENST00000576848 588 ntTSL 4 BASIC33.02■■■□□ 2.88
SBNO1A3KN83 AL117332.1-201ENST00000622628 974 ntBASIC33.02■■■□□ 2.88
SBNO1A3KN83 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
SBNO1A3KN83 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC33.02■■■□□ 2.88
SBNO1A3KN83 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC33.02■■■□□ 2.88
SBNO1A3KN83 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC33.02■■■□□ 2.88
SBNO1A3KN83 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC33.01■■■□□ 2.88
SBNO1A3KN83 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC33.01■■■□□ 2.88
SBNO1A3KN83 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC33■■■□□ 2.87
SBNO1A3KN83 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC33■■■□□ 2.87
SBNO1A3KN83 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
SBNO1A3KN83 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC33■■■□□ 2.87
SBNO1A3KN83 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC33■■■□□ 2.87
SBNO1A3KN83 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC33■■■□□ 2.87
SBNO1A3KN83 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
SBNO1A3KN83 AL136116.3-201ENST00000402907 1138 ntBASIC32.99■■■□□ 2.87
SBNO1A3KN83 AC110285.6-201ENST00000617652 491 ntBASIC32.99■■■□□ 2.87
SBNO1A3KN83 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC32.99■■■□□ 2.87
SBNO1A3KN83 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
SBNO1A3KN83 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC32.98■■■□□ 2.87
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms