Protein–RNA interactions for Protein: A0A1B0GVG4

CCDC194, Coiled-coil domain-containing protein 194, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC194A0A1B0GVG4 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
CCDC194A0A1B0GVG4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
CCDC194A0A1B0GVG4 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CCDC194A0A1B0GVG4 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
CCDC194A0A1B0GVG4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC27.51■■□□□ 1.99
CCDC194A0A1B0GVG4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CCDC194A0A1B0GVG4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC27.51■■□□□ 1.99
CCDC194A0A1B0GVG4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC27.51■■□□□ 1.99
CCDC194A0A1B0GVG4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CCDC194A0A1B0GVG4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC27.5■■□□□ 1.99
CCDC194A0A1B0GVG4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
CCDC194A0A1B0GVG4 AC096887.2-201ENST00000623443 1957 ntBASIC27.5■■□□□ 1.99
CCDC194A0A1B0GVG4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CCDC194A0A1B0GVG4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
CCDC194A0A1B0GVG4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CCDC194A0A1B0GVG4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
CCDC194A0A1B0GVG4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CCDC194A0A1B0GVG4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CCDC194A0A1B0GVG4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CCDC194A0A1B0GVG4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CCDC194A0A1B0GVG4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CCDC194A0A1B0GVG4 NTF6A-201ENST00000591175 560 ntBASIC27.49■■□□□ 1.99
CCDC194A0A1B0GVG4 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
CCDC194A0A1B0GVG4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CCDC194A0A1B0GVG4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC27.48■■□□□ 1.99
CCDC194A0A1B0GVG4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC27.48■■□□□ 1.99
CCDC194A0A1B0GVG4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CCDC194A0A1B0GVG4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC27.48■■□□□ 1.99
CCDC194A0A1B0GVG4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC27.48■■□□□ 1.99
CCDC194A0A1B0GVG4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC27.48■■□□□ 1.99
CCDC194A0A1B0GVG4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC27.47■■□□□ 1.99
CCDC194A0A1B0GVG4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CCDC194A0A1B0GVG4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
CCDC194A0A1B0GVG4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC27.47■■□□□ 1.99
CCDC194A0A1B0GVG4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC27.47■■□□□ 1.99
CCDC194A0A1B0GVG4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CCDC194A0A1B0GVG4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CCDC194A0A1B0GVG4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CCDC194A0A1B0GVG4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CCDC194A0A1B0GVG4 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC27.46■■□□□ 1.99
CCDC194A0A1B0GVG4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC27.46■■□□□ 1.99
CCDC194A0A1B0GVG4 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
CCDC194A0A1B0GVG4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC27.45■■□□□ 1.99
CCDC194A0A1B0GVG4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC27.45■■□□□ 1.99
CCDC194A0A1B0GVG4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
CCDC194A0A1B0GVG4 KRT18P60-201ENST00000312876 1297 ntBASIC27.45■■□□□ 1.98
CCDC194A0A1B0GVG4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
CCDC194A0A1B0GVG4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC27.45■■□□□ 1.98
CCDC194A0A1B0GVG4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC27.45■■□□□ 1.98
CCDC194A0A1B0GVG4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC27.45■■□□□ 1.98
CCDC194A0A1B0GVG4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CCDC194A0A1B0GVG4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC27.45■■□□□ 1.98
CCDC194A0A1B0GVG4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC27.44■■□□□ 1.98
CCDC194A0A1B0GVG4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CCDC194A0A1B0GVG4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CCDC194A0A1B0GVG4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
CCDC194A0A1B0GVG4 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
CCDC194A0A1B0GVG4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC27.44■■□□□ 1.98
CCDC194A0A1B0GVG4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC27.44■■□□□ 1.98
CCDC194A0A1B0GVG4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
CCDC194A0A1B0GVG4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
CCDC194A0A1B0GVG4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CCDC194A0A1B0GVG4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CCDC194A0A1B0GVG4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC27.42■■□□□ 1.98
CCDC194A0A1B0GVG4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC27.42■■□□□ 1.98
CCDC194A0A1B0GVG4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
CCDC194A0A1B0GVG4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CCDC194A0A1B0GVG4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CCDC194A0A1B0GVG4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CCDC194A0A1B0GVG4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CCDC194A0A1B0GVG4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CCDC194A0A1B0GVG4 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CCDC194A0A1B0GVG4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CCDC194A0A1B0GVG4 SPCS2P3-201ENST00000500401 656 ntBASIC27.4■■□□□ 1.98
CCDC194A0A1B0GVG4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
CCDC194A0A1B0GVG4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CCDC194A0A1B0GVG4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CCDC194A0A1B0GVG4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC27.39■■□□□ 1.98
CCDC194A0A1B0GVG4 AC129492.7-201ENST00000622992 756 ntBASIC27.39■■□□□ 1.98
CCDC194A0A1B0GVG4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC27.39■■□□□ 1.98
CCDC194A0A1B0GVG4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC27.39■■□□□ 1.97
CCDC194A0A1B0GVG4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC27.39■■□□□ 1.97
CCDC194A0A1B0GVG4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC27.38■■□□□ 1.97
CCDC194A0A1B0GVG4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CCDC194A0A1B0GVG4 DUX4L9-201ENST00000449051 1259 ntBASIC27.38■■□□□ 1.97
CCDC194A0A1B0GVG4 AC018755.3-202ENST00000596210 929 ntBASIC27.38■■□□□ 1.97
CCDC194A0A1B0GVG4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC27.38■■□□□ 1.97
CCDC194A0A1B0GVG4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CCDC194A0A1B0GVG4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
CCDC194A0A1B0GVG4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
CCDC194A0A1B0GVG4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CCDC194A0A1B0GVG4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CCDC194A0A1B0GVG4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CCDC194A0A1B0GVG4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
CCDC194A0A1B0GVG4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CCDC194A0A1B0GVG4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CCDC194A0A1B0GVG4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
CCDC194A0A1B0GVG4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
CCDC194A0A1B0GVG4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CCDC194A0A1B0GVG4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC27.35■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms