Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TRAV34A0A0B4J273 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV34A0A0B4J273 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV34A0A0B4J273 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV34A0A0B4J273 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.41■□□□□ 0.54
TRAV34A0A0B4J273 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TRAV34A0A0B4J273 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV34A0A0B4J273 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV34A0A0B4J273 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV34A0A0B4J273 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAV34A0A0B4J273 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TRAV34A0A0B4J273 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAV34A0A0B4J273 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV34A0A0B4J273 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.4■□□□□ 0.54
TRAV34A0A0B4J273 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.4■□□□□ 0.54
TRAV34A0A0B4J273 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV34A0A0B4J273 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV34A0A0B4J273 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV34A0A0B4J273 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.4■□□□□ 0.54
TRAV34A0A0B4J273 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV34A0A0B4J273 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRAV34A0A0B4J273 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRAV34A0A0B4J273 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRAV34A0A0B4J273 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRAV34A0A0B4J273 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TRAV34A0A0B4J273 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
TRAV34A0A0B4J273 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
TRAV34A0A0B4J273 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV34A0A0B4J273 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV34A0A0B4J273 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV34A0A0B4J273 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC18.39■□□□□ 0.53
TRAV34A0A0B4J273 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAV34A0A0B4J273 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV34A0A0B4J273 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV34A0A0B4J273 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAV34A0A0B4J273 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV34A0A0B4J273 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC18.38■□□□□ 0.53
TRAV34A0A0B4J273 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAV34A0A0B4J273 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV34A0A0B4J273 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV34A0A0B4J273 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.37■□□□□ 0.53
TRAV34A0A0B4J273 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TRAV34A0A0B4J273 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
TRAV34A0A0B4J273 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV34A0A0B4J273 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV34A0A0B4J273 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV34A0A0B4J273 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAV34A0A0B4J273 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV34A0A0B4J273 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV34A0A0B4J273 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV34A0A0B4J273 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAV34A0A0B4J273 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV34A0A0B4J273 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV34A0A0B4J273 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV34A0A0B4J273 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.36■□□□□ 0.53
TRAV34A0A0B4J273 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAV34A0A0B4J273 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAV34A0A0B4J273 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.36■□□□□ 0.53
TRAV34A0A0B4J273 DUX4L28-201ENST00000623687 678 ntBASIC18.36■□□□□ 0.53
TRAV34A0A0B4J273 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV34A0A0B4J273 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV34A0A0B4J273 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV34A0A0B4J273 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.35■□□□□ 0.53
TRAV34A0A0B4J273 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV34A0A0B4J273 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV34A0A0B4J273 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV34A0A0B4J273 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV34A0A0B4J273 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV34A0A0B4J273 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TRAV34A0A0B4J273 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV34A0A0B4J273 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV34A0A0B4J273 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV34A0A0B4J273 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV34A0A0B4J273 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC18.33■□□□□ 0.53
TRAV34A0A0B4J273 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
TRAV34A0A0B4J273 AC096887.2-201ENST00000623443 1957 ntBASIC18.33■□□□□ 0.53
TRAV34A0A0B4J273 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.33■□□□□ 0.52
TRAV34A0A0B4J273 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.32■□□□□ 0.52
TRAV34A0A0B4J273 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV34A0A0B4J273 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV34A0A0B4J273 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.32■□□□□ 0.52
TRAV34A0A0B4J273 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV34A0A0B4J273 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.32■□□□□ 0.52
TRAV34A0A0B4J273 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV34A0A0B4J273 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.32■□□□□ 0.52
TRAV34A0A0B4J273 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV34A0A0B4J273 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV34A0A0B4J273 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAV34A0A0B4J273 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.31■□□□□ 0.52
TRAV34A0A0B4J273 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV34A0A0B4J273 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV34A0A0B4J273 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAV34A0A0B4J273 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV34A0A0B4J273 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV34A0A0B4J273 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV34A0A0B4J273 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAV34A0A0B4J273 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV34A0A0B4J273 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV34A0A0B4J273 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV34A0A0B4J273 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms