Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC187A0A096LP49 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC187A0A096LP49 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC187A0A096LP49 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC187A0A096LP49 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.02■■□□□ 1.28
CCDC187A0A096LP49 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.02■■□□□ 1.28
CCDC187A0A096LP49 KRT16P3-201ENST00000439127 1283 ntBASIC23.01■■□□□ 1.27
CCDC187A0A096LP49 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.01■■□□□ 1.27
CCDC187A0A096LP49 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.01■■□□□ 1.27
CCDC187A0A096LP49 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.01■■□□□ 1.27
CCDC187A0A096LP49 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.01■■□□□ 1.27
CCDC187A0A096LP49 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC187A0A096LP49 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23■■□□□ 1.27
CCDC187A0A096LP49 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23■■□□□ 1.27
CCDC187A0A096LP49 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23■■□□□ 1.27
CCDC187A0A096LP49 UNC93B8-201ENST00000511903 705 ntBASIC23■■□□□ 1.27
CCDC187A0A096LP49 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCDC187A0A096LP49 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC187A0A096LP49 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC22.99■■□□□ 1.27
CCDC187A0A096LP49 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.99■■□□□ 1.27
CCDC187A0A096LP49 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.99■■□□□ 1.27
CCDC187A0A096LP49 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC187A0A096LP49 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC187A0A096LP49 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
CCDC187A0A096LP49 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC187A0A096LP49 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC187A0A096LP49 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC187A0A096LP49 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC187A0A096LP49 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC187A0A096LP49 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC187A0A096LP49 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC187A0A096LP49 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC187A0A096LP49 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
CCDC187A0A096LP49 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC187A0A096LP49 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC187A0A096LP49 AC137630.3-201ENST00000607245 391 ntBASIC22.97■■□□□ 1.27
CCDC187A0A096LP49 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.97■■□□□ 1.27
CCDC187A0A096LP49 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.96■■□□□ 1.27
CCDC187A0A096LP49 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
CCDC187A0A096LP49 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC187A0A096LP49 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC187A0A096LP49 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
CCDC187A0A096LP49 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
CCDC187A0A096LP49 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.95■■□□□ 1.26
CCDC187A0A096LP49 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.95■■□□□ 1.26
CCDC187A0A096LP49 AC139426.1-201ENST00000568218 2529 ntBASIC22.95■■□□□ 1.26
CCDC187A0A096LP49 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CCDC187A0A096LP49 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CCDC187A0A096LP49 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CCDC187A0A096LP49 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.94■■□□□ 1.26
CCDC187A0A096LP49 AC120024.1-201ENST00000562672 995 ntBASIC22.94■■□□□ 1.26
CCDC187A0A096LP49 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.94■■□□□ 1.26
CCDC187A0A096LP49 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CCDC187A0A096LP49 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CCDC187A0A096LP49 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
CCDC187A0A096LP49 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.93■■□□□ 1.26
CCDC187A0A096LP49 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.93■■□□□ 1.26
CCDC187A0A096LP49 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CCDC187A0A096LP49 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
CCDC187A0A096LP49 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCDC187A0A096LP49 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
CCDC187A0A096LP49 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
CCDC187A0A096LP49 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCDC187A0A096LP49 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCDC187A0A096LP49 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCDC187A0A096LP49 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.92■■□□□ 1.26
CCDC187A0A096LP49 TSPY9P-201ENST00000440215 945 ntBASIC22.92■■□□□ 1.26
CCDC187A0A096LP49 TSPY11P-201ENST00000442607 1045 ntBASIC22.92■■□□□ 1.26
CCDC187A0A096LP49 DRD5P2-201ENST00000421395 2012 ntBASIC22.92■■□□□ 1.26
CCDC187A0A096LP49 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CCDC187A0A096LP49 AC021242.3-201ENST00000607598 1377 ntBASIC22.91■■□□□ 1.26
CCDC187A0A096LP49 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CCDC187A0A096LP49 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CCDC187A0A096LP49 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CCDC187A0A096LP49 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.91■■□□□ 1.26
CCDC187A0A096LP49 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CCDC187A0A096LP49 LINC01003-201ENST00000564834 1764 ntBASIC22.91■■□□□ 1.26
CCDC187A0A096LP49 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CCDC187A0A096LP49 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.9■■□□□ 1.26
CCDC187A0A096LP49 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
CCDC187A0A096LP49 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.9■■□□□ 1.26
CCDC187A0A096LP49 BX255925.1-201ENST00000566954 1854 ntBASIC22.9■■□□□ 1.26
CCDC187A0A096LP49 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CCDC187A0A096LP49 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.9■■□□□ 1.26
CCDC187A0A096LP49 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CCDC187A0A096LP49 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CCDC187A0A096LP49 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.89■■□□□ 1.25
CCDC187A0A096LP49 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
CCDC187A0A096LP49 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.89■■□□□ 1.25
CCDC187A0A096LP49 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CCDC187A0A096LP49 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.89■■□□□ 1.25
CCDC187A0A096LP49 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
CCDC187A0A096LP49 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
CCDC187A0A096LP49 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CCDC187A0A096LP49 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.89■■□□□ 1.25
CCDC187A0A096LP49 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.88■■□□□ 1.25
CCDC187A0A096LP49 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.88■■□□□ 1.25
CCDC187A0A096LP49 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
CCDC187A0A096LP49 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
CCDC187A0A096LP49 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms