Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV26-1A0A087WT03 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV26-1A0A087WT03 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV26-1A0A087WT03 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV26-1A0A087WT03 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV26-1A0A087WT03 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV26-1A0A087WT03 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRAV26-1A0A087WT03 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV26-1A0A087WT03 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV26-1A0A087WT03 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV26-1A0A087WT03 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.15■□□□□ 0.34
TRAV26-1A0A087WT03 ABHD17AP5-201ENST00000580133 923 ntBASIC17.15■□□□□ 0.34
TRAV26-1A0A087WT03 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV26-1A0A087WT03 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV26-1A0A087WT03 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV26-1A0A087WT03 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TRAV26-1A0A087WT03 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TRAV26-1A0A087WT03 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC17.14■□□□□ 0.34
TRAV26-1A0A087WT03 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV26-1A0A087WT03 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV26-1A0A087WT03 RP9P-202ENST00000450133 1212 ntBASIC17.14■□□□□ 0.33
TRAV26-1A0A087WT03 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV26-1A0A087WT03 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
TRAV26-1A0A087WT03 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.14■□□□□ 0.33
TRAV26-1A0A087WT03 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV26-1A0A087WT03 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV26-1A0A087WT03 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
TRAV26-1A0A087WT03 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV26-1A0A087WT03 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRAV26-1A0A087WT03 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAV26-1A0A087WT03 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC17.13■□□□□ 0.33
TRAV26-1A0A087WT03 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV26-1A0A087WT03 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV26-1A0A087WT03 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAV26-1A0A087WT03 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV26-1A0A087WT03 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV26-1A0A087WT03 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAV26-1A0A087WT03 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV26-1A0A087WT03 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRAV26-1A0A087WT03 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV26-1A0A087WT03 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV26-1A0A087WT03 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV26-1A0A087WT03 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV26-1A0A087WT03 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV26-1A0A087WT03 LINC00543-201ENST00000567234 1845 ntBASIC17.12■□□□□ 0.33
TRAV26-1A0A087WT03 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV26-1A0A087WT03 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAV26-1A0A087WT03 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV26-1A0A087WT03 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRAV26-1A0A087WT03 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAV26-1A0A087WT03 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAV26-1A0A087WT03 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.11■□□□□ 0.33
TRAV26-1A0A087WT03 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRAV26-1A0A087WT03 AC093536.1-201ENST00000569153 554 ntBASIC17.11■□□□□ 0.33
TRAV26-1A0A087WT03 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRAV26-1A0A087WT03 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV26-1A0A087WT03 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV26-1A0A087WT03 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV26-1A0A087WT03 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.11■□□□□ 0.33
TRAV26-1A0A087WT03 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV26-1A0A087WT03 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV26-1A0A087WT03 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV26-1A0A087WT03 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV26-1A0A087WT03 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAV26-1A0A087WT03 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TRAV26-1A0A087WT03 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV26-1A0A087WT03 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV26-1A0A087WT03 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV26-1A0A087WT03 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV26-1A0A087WT03 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV26-1A0A087WT03 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV26-1A0A087WT03 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV26-1A0A087WT03 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRAV26-1A0A087WT03 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV26-1A0A087WT03 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV26-1A0A087WT03 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRAV26-1A0A087WT03 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.09■□□□□ 0.33
TRAV26-1A0A087WT03 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TRAV26-1A0A087WT03 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
TRAV26-1A0A087WT03 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV26-1A0A087WT03 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TRAV26-1A0A087WT03 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV26-1A0A087WT03 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV26-1A0A087WT03 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TRAV26-1A0A087WT03 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
TRAV26-1A0A087WT03 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TRAV26-1A0A087WT03 GFER-205ENST00000569451 517 ntTSL 5 BASIC17.08■□□□□ 0.32
TRAV26-1A0A087WT03 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAV26-1A0A087WT03 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV26-1A0A087WT03 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAV26-1A0A087WT03 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TRAV26-1A0A087WT03 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAV26-1A0A087WT03 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.07■□□□□ 0.32
TRAV26-1A0A087WT03 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV26-1A0A087WT03 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV26-1A0A087WT03 AC133552.2-201ENST00000619106 1032 ntBASIC17.07■□□□□ 0.32
TRAV26-1A0A087WT03 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV26-1A0A087WT03 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV26-1A0A087WT03 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV26-1A0A087WT03 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms