Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV9-2A0A087WT02 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV9-2A0A087WT02 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAV9-2A0A087WT02 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC17.68■□□□□ 0.42
TRAV9-2A0A087WT02 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV9-2A0A087WT02 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV9-2A0A087WT02 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV9-2A0A087WT02 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV9-2A0A087WT02 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV9-2A0A087WT02 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV9-2A0A087WT02 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TRAV9-2A0A087WT02 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV9-2A0A087WT02 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV9-2A0A087WT02 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.66■□□□□ 0.42
TRAV9-2A0A087WT02 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV9-2A0A087WT02 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV9-2A0A087WT02 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV9-2A0A087WT02 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV9-2A0A087WT02 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
TRAV9-2A0A087WT02 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV9-2A0A087WT02 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TRAV9-2A0A087WT02 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TRAV9-2A0A087WT02 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TRAV9-2A0A087WT02 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV9-2A0A087WT02 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC17.65■□□□□ 0.42
TRAV9-2A0A087WT02 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV9-2A0A087WT02 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV9-2A0A087WT02 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAV9-2A0A087WT02 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
TRAV9-2A0A087WT02 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAV9-2A0A087WT02 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV9-2A0A087WT02 LINC01971-201ENST00000617888 1048 ntBASIC17.64■□□□□ 0.41
TRAV9-2A0A087WT02 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV9-2A0A087WT02 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRAV9-2A0A087WT02 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV9-2A0A087WT02 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV9-2A0A087WT02 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TRAV9-2A0A087WT02 AL024507.2-201ENST00000606070 2574 ntBASIC17.63■□□□□ 0.41
TRAV9-2A0A087WT02 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV9-2A0A087WT02 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV9-2A0A087WT02 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAV9-2A0A087WT02 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV9-2A0A087WT02 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV9-2A0A087WT02 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV9-2A0A087WT02 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV9-2A0A087WT02 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV9-2A0A087WT02 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.62■□□□□ 0.41
TRAV9-2A0A087WT02 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV9-2A0A087WT02 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV9-2A0A087WT02 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV9-2A0A087WT02 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV9-2A0A087WT02 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV9-2A0A087WT02 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TRAV9-2A0A087WT02 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV9-2A0A087WT02 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
TRAV9-2A0A087WT02 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC17.61■□□□□ 0.41
TRAV9-2A0A087WT02 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.61■□□□□ 0.41
TRAV9-2A0A087WT02 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.61■□□□□ 0.41
TRAV9-2A0A087WT02 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV9-2A0A087WT02 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV9-2A0A087WT02 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV9-2A0A087WT02 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAV9-2A0A087WT02 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV9-2A0A087WT02 CALM3-209ENST00000597743 577 ntTSL 4 BASIC17.6■□□□□ 0.41
TRAV9-2A0A087WT02 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV9-2A0A087WT02 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAV9-2A0A087WT02 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV9-2A0A087WT02 AC138932.3-201ENST00000567634 1902 ntBASIC17.6■□□□□ 0.41
TRAV9-2A0A087WT02 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV9-2A0A087WT02 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV9-2A0A087WT02 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV9-2A0A087WT02 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV9-2A0A087WT02 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAV9-2A0A087WT02 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV9-2A0A087WT02 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAV9-2A0A087WT02 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
TRAV9-2A0A087WT02 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.58■□□□□ 0.41
TRAV9-2A0A087WT02 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV9-2A0A087WT02 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV9-2A0A087WT02 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TRAV9-2A0A087WT02 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TRAV9-2A0A087WT02 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV9-2A0A087WT02 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV9-2A0A087WT02 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV9-2A0A087WT02 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC17.58■□□□□ 0.4
TRAV9-2A0A087WT02 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV9-2A0A087WT02 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV9-2A0A087WT02 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC17.58■□□□□ 0.4
TRAV9-2A0A087WT02 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV9-2A0A087WT02 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV9-2A0A087WT02 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.57■□□□□ 0.4
TRAV9-2A0A087WT02 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV9-2A0A087WT02 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV9-2A0A087WT02 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRAV9-2A0A087WT02 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV9-2A0A087WT02 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV9-2A0A087WT02 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV9-2A0A087WT02 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV9-2A0A087WT02 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAV9-2A0A087WT02 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms