Protein–RNA interactions for Protein: A0A075B6N3

TRBV24-1, T-cell receptor beta variable 24-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV24-1A0A075B6N3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV24-1A0A075B6N3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.34■□□□□ 0.53
TRBV24-1A0A075B6N3 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV24-1A0A075B6N3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV24-1A0A075B6N3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC18.34■□□□□ 0.53
TRBV24-1A0A075B6N3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV24-1A0A075B6N3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TRBV24-1A0A075B6N3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.34■□□□□ 0.53
TRBV24-1A0A075B6N3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRBV24-1A0A075B6N3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRBV24-1A0A075B6N3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
TRBV24-1A0A075B6N3 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV24-1A0A075B6N3 AP003733.4-201ENST00000623785 1697 ntBASIC18.33■□□□□ 0.52
TRBV24-1A0A075B6N3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV24-1A0A075B6N3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV24-1A0A075B6N3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV24-1A0A075B6N3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.32■□□□□ 0.52
TRBV24-1A0A075B6N3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.32■□□□□ 0.52
TRBV24-1A0A075B6N3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TRBV24-1A0A075B6N3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
TRBV24-1A0A075B6N3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV24-1A0A075B6N3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
TRBV24-1A0A075B6N3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.32■□□□□ 0.52
TRBV24-1A0A075B6N3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV24-1A0A075B6N3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV24-1A0A075B6N3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC18.31■□□□□ 0.52
TRBV24-1A0A075B6N3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TRBV24-1A0A075B6N3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV24-1A0A075B6N3 WHAMMP2-203ENST00000563942 1603 ntBASIC18.31■□□□□ 0.52
TRBV24-1A0A075B6N3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV24-1A0A075B6N3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV24-1A0A075B6N3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV24-1A0A075B6N3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV24-1A0A075B6N3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV24-1A0A075B6N3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV24-1A0A075B6N3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV24-1A0A075B6N3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV24-1A0A075B6N3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV24-1A0A075B6N3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV24-1A0A075B6N3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.29■□□□□ 0.52
TRBV24-1A0A075B6N3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV24-1A0A075B6N3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV24-1A0A075B6N3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV24-1A0A075B6N3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV24-1A0A075B6N3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.28■□□□□ 0.52
TRBV24-1A0A075B6N3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TRBV24-1A0A075B6N3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.28■□□□□ 0.52
TRBV24-1A0A075B6N3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.28■□□□□ 0.52
TRBV24-1A0A075B6N3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV24-1A0A075B6N3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV24-1A0A075B6N3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV24-1A0A075B6N3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV24-1A0A075B6N3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV24-1A0A075B6N3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV24-1A0A075B6N3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV24-1A0A075B6N3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV24-1A0A075B6N3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV24-1A0A075B6N3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.28■□□□□ 0.52
TRBV24-1A0A075B6N3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV24-1A0A075B6N3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV24-1A0A075B6N3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV24-1A0A075B6N3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV24-1A0A075B6N3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.27■□□□□ 0.52
TRBV24-1A0A075B6N3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TRBV24-1A0A075B6N3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.27■□□□□ 0.52
TRBV24-1A0A075B6N3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV24-1A0A075B6N3 AC141586.4-201ENST00000624558 1573 ntBASIC18.27■□□□□ 0.52
TRBV24-1A0A075B6N3 C9orf163-202ENST00000624034 2573 ntBASIC18.27■□□□□ 0.52
TRBV24-1A0A075B6N3 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV24-1A0A075B6N3 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC18.27■□□□□ 0.52
TRBV24-1A0A075B6N3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TRBV24-1A0A075B6N3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRBV24-1A0A075B6N3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.27■□□□□ 0.51
TRBV24-1A0A075B6N3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.27■□□□□ 0.51
TRBV24-1A0A075B6N3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.27■□□□□ 0.51
TRBV24-1A0A075B6N3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.27■□□□□ 0.51
TRBV24-1A0A075B6N3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.26■□□□□ 0.51
TRBV24-1A0A075B6N3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.26■□□□□ 0.51
TRBV24-1A0A075B6N3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV24-1A0A075B6N3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV24-1A0A075B6N3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV24-1A0A075B6N3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV24-1A0A075B6N3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV24-1A0A075B6N3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV24-1A0A075B6N3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRBV24-1A0A075B6N3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV24-1A0A075B6N3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV24-1A0A075B6N3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV24-1A0A075B6N3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV24-1A0A075B6N3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TRBV24-1A0A075B6N3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRBV24-1A0A075B6N3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV24-1A0A075B6N3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV24-1A0A075B6N3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV24-1A0A075B6N3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV24-1A0A075B6N3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TRBV24-1A0A075B6N3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.24■□□□□ 0.51
TRBV24-1A0A075B6N3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV24-1A0A075B6N3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV24-1A0A075B6N3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms