Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.53■□□□□ 0.24
HS3ST3A1Q9Y663 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.52■□□□□ 0.24
HS3ST3A1Q9Y663 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.52■□□□□ 0.24
HS3ST3A1Q9Y663 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HS3ST3A1Q9Y663 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HS3ST3A1Q9Y663 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.52■□□□□ 0.24
HS3ST3A1Q9Y663 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.52■□□□□ 0.24
HS3ST3A1Q9Y663 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HS3ST3A1Q9Y663 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HS3ST3A1Q9Y663 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HS3ST3A1Q9Y663 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
HS3ST3A1Q9Y663 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HS3ST3A1Q9Y663 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HS3ST3A1Q9Y663 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.52■□□□□ 0.24
HS3ST3A1Q9Y663 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.52■□□□□ 0.24
HS3ST3A1Q9Y663 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.52■□□□□ 0.24
HS3ST3A1Q9Y663 KRT18P34-201ENST00000488218 1270 ntBASIC16.52■□□□□ 0.24
HS3ST3A1Q9Y663 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.52■□□□□ 0.24
HS3ST3A1Q9Y663 SLC25A39P2-201ENST00000537614 270 ntBASIC16.52■□□□□ 0.24
HS3ST3A1Q9Y663 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.52■□□□□ 0.24
HS3ST3A1Q9Y663 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
HS3ST3A1Q9Y663 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.52■□□□□ 0.24
HS3ST3A1Q9Y663 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.52■□□□□ 0.24
HS3ST3A1Q9Y663 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.52■□□□□ 0.24
HS3ST3A1Q9Y663 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HS3ST3A1Q9Y663 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.52■□□□□ 0.23
HS3ST3A1Q9Y663 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HS3ST3A1Q9Y663 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HS3ST3A1Q9Y663 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.52■□□□□ 0.23
HS3ST3A1Q9Y663 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HS3ST3A1Q9Y663 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HS3ST3A1Q9Y663 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.52■□□□□ 0.23
HS3ST3A1Q9Y663 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HS3ST3A1Q9Y663 LINC00895-201ENST00000629028 1637 ntBASIC16.52■□□□□ 0.23
HS3ST3A1Q9Y663 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HS3ST3A1Q9Y663 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HS3ST3A1Q9Y663 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 AC067852.2-201ENST00000590513 2313 ntBASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HS3ST3A1Q9Y663 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
HS3ST3A1Q9Y663 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HS3ST3A1Q9Y663 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
HS3ST3A1Q9Y663 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HS3ST3A1Q9Y663 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HS3ST3A1Q9Y663 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HS3ST3A1Q9Y663 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.5■□□□□ 0.23
HS3ST3A1Q9Y663 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HS3ST3A1Q9Y663 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.5■□□□□ 0.23
HS3ST3A1Q9Y663 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HS3ST3A1Q9Y663 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HS3ST3A1Q9Y663 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HS3ST3A1Q9Y663 AC006277.1-201ENST00000624348 1610 ntBASIC16.5■□□□□ 0.23
HS3ST3A1Q9Y663 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HS3ST3A1Q9Y663 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HS3ST3A1Q9Y663 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HS3ST3A1Q9Y663 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HS3ST3A1Q9Y663 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.5■□□□□ 0.23
HS3ST3A1Q9Y663 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.5■□□□□ 0.23
HS3ST3A1Q9Y663 SPDYE14P-201ENST00000442619 822 ntBASIC16.5■□□□□ 0.23
HS3ST3A1Q9Y663 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms