Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDHB2Q9Y5E7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PCDHB2Q9Y5E7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
PCDHB2Q9Y5E7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB2Q9Y5E7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB2Q9Y5E7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PCDHB2Q9Y5E7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB2Q9Y5E7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB2Q9Y5E7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB2Q9Y5E7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB2Q9Y5E7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
PCDHB2Q9Y5E7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB2Q9Y5E7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB2Q9Y5E7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB2Q9Y5E7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB2Q9Y5E7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB2Q9Y5E7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PCDHB2Q9Y5E7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB2Q9Y5E7 LINC02012-201ENST00000608206 1725 ntBASIC18.52■□□□□ 0.56
PCDHB2Q9Y5E7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
PCDHB2Q9Y5E7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB2Q9Y5E7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.52■□□□□ 0.56
PCDHB2Q9Y5E7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB2Q9Y5E7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDHB2Q9Y5E7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PCDHB2Q9Y5E7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB2Q9Y5E7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB2Q9Y5E7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB2Q9Y5E7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB2Q9Y5E7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB2Q9Y5E7 METTL21AP1-201ENST00000438852 635 ntBASIC18.52■□□□□ 0.56
PCDHB2Q9Y5E7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PCDHB2Q9Y5E7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.52■□□□□ 0.56
PCDHB2Q9Y5E7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHB2Q9Y5E7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHB2Q9Y5E7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB2Q9Y5E7 REXO1L3P-201ENST00000622202 1288 ntBASIC18.52■□□□□ 0.56
PCDHB2Q9Y5E7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDHB2Q9Y5E7 PRORSD1P-202ENST00000563365 2154 ntBASIC18.52■□□□□ 0.56
PCDHB2Q9Y5E7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHB2Q9Y5E7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHB2Q9Y5E7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.52■□□□□ 0.55
PCDHB2Q9Y5E7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHB2Q9Y5E7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.52■□□□□ 0.55
PCDHB2Q9Y5E7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHB2Q9Y5E7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHB2Q9Y5E7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHB2Q9Y5E7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.52■□□□□ 0.55
PCDHB2Q9Y5E7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHB2Q9Y5E7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PCDHB2Q9Y5E7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHB2Q9Y5E7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB2Q9Y5E7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHB2Q9Y5E7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB2Q9Y5E7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB2Q9Y5E7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.51■□□□□ 0.55
PCDHB2Q9Y5E7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB2Q9Y5E7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB2Q9Y5E7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB2Q9Y5E7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.51■□□□□ 0.55
PCDHB2Q9Y5E7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.51■□□□□ 0.55
PCDHB2Q9Y5E7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHB2Q9Y5E7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHB2Q9Y5E7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB2Q9Y5E7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.51■□□□□ 0.55
PCDHB2Q9Y5E7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHB2Q9Y5E7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB2Q9Y5E7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PCDHB2Q9Y5E7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHB2Q9Y5E7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB2Q9Y5E7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB2Q9Y5E7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PCDHB2Q9Y5E7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB2Q9Y5E7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB2Q9Y5E7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHB2Q9Y5E7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHB2Q9Y5E7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.5■□□□□ 0.55
PCDHB2Q9Y5E7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHB2Q9Y5E7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB2Q9Y5E7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB2Q9Y5E7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PCDHB2Q9Y5E7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB2Q9Y5E7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PCDHB2Q9Y5E7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB2Q9Y5E7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB2Q9Y5E7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB2Q9Y5E7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB2Q9Y5E7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.5■□□□□ 0.55
PCDHB2Q9Y5E7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHB2Q9Y5E7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHB2Q9Y5E7 AC112191.1-201ENST00000523689 701 ntBASIC18.5■□□□□ 0.55
PCDHB2Q9Y5E7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB2Q9Y5E7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB2Q9Y5E7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.5■□□□□ 0.55
PCDHB2Q9Y5E7 AL645728.2-201ENST00000641974 660 ntBASIC18.5■□□□□ 0.55
PCDHB2Q9Y5E7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB2Q9Y5E7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB2Q9Y5E7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHB2Q9Y5E7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB2Q9Y5E7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms