Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 UCHL3-206ENST00000618773 1050 ntTSL 5 BASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 AL162727.3-201ENST00000635661 2787 ntBASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 LINC00554-201ENST00000564841 3011 ntBASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 MYB-201ENST00000316528 3571 ntTSL 5 BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 MYB-241ENST00000616088 3573 ntTSL 5 BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 ATP6AP2-204ENST00000447485 1254 ntTSL 5 BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 AC139887.4-201ENST00000607877 719 ntBASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC20.56■□□□□ 0.88
FOXD4L1Q9NU39 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 SEPT7P7-201ENST00000420492 1301 ntBASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 UBE2V2P4-201ENST00000447495 259 ntBASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 COX11P1-201ENST00000489116 835 ntBASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 LINC01571-201ENST00000563603 811 ntTSL 2 BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 AC109462.3-201ENST00000573934 613 ntBASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 AC025165.5-201ENST00000602802 578 ntBASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 AL353770.4-202ENST00000621296 1126 ntTSL 3 BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 BX005040.1-201ENST00000622281 1126 ntTSL 5 BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 AC006963.1-201ENST00000624003 1052 ntBASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 AC020978.9-201ENST00000624380 1141 ntBASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXD4L1Q9NU39 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXD4L1Q9NU39 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms