Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.031e-8■■□□□ 13
XRN2Q9H0D6 ABCF1-204ENST00000468958 606 ntTSL 314.9□□□□□ -0.021e-8■■□□□ 13
XRN2Q9H0D6 PKDCC-205ENST00000475868 725 ntTSL 214.9□□□□□ -0.021e-8■■□□□ 13
XRN2Q9H0D6 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC14.15□□□□□ -0.141e-8■■□□□ 13
XRN2Q9H0D6 ATP7B-210ENST00000634296 2328 ntTSL 514.13□□□□□ -0.151e-8■■□□□ 13
XRN2Q9H0D6 ATP7B-214ENST00000634810 5825 ntTSL 1 (best)13.75□□□□□ -0.211e-8■■□□□ 13
XRN2Q9H0D6 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC13.63□□□□□ -0.231e-8■■□□□ 13
XRN2Q9H0D6 CCT5-209ENST00000511700 582 ntTSL 313.41□□□□□ -0.261e-8■■□□□ 13
XRN2Q9H0D6 CCT5-203ENST00000503026 1933 ntTSL 2 BASIC13.13□□□□□ -0.311e-8■■□□□ 13
XRN2Q9H0D6 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.381e-8■■□□□ 13
XRN2Q9H0D6 CCT5-206ENST00000508451 555 ntTSL 212.5□□□□□ -0.411e-8■■□□□ 13
XRN2Q9H0D6 MKLN1-209ENST00000494785 2386 ntTSL 1 (best)12.34□□□□□ -0.431e-8■■□□□ 13
XRN2Q9H0D6 TRIOBP-202ENST00000344404 7300 ntTSL 212.14□□□□□ -0.471e-8■■□□□ 13
XRN2Q9H0D6 ABCF1-203ENST00000441867 1074 ntTSL 511.61□□□□□ -0.551e-8■■□□□ 13
XRN2Q9H0D6 ATP7B-213ENST00000634620 5653 ntTSL 1 (best)11.5□□□□□ -0.571e-8■■□□□ 13
XRN2Q9H0D6 MKLN1-206ENST00000458153 2448 ntTSL 211.47□□□□□ -0.571e-8■■□□□ 13
XRN2Q9H0D6 TRIOBP-204ENST00000406386 10129 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.631e-8■■□□□ 13
XRN2Q9H0D6 ATP7B-201ENST00000242839 6638 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.631e-8■■□□□ 13
XRN2Q9H0D6 CCT5-202ENST00000423695 1232 ntTSL 211.07□□□□□ -0.641e-8■■□□□ 13
XRN2Q9H0D6 ABCF1-201ENST00000326195 3481 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.651e-8■■□□□ 13
XRN2Q9H0D6 ATP7B-204ENST00000400370 3252 ntTSL 1 (best) BASIC10.66□□□□□ -0.71e-8■■□□□ 13
XRN2Q9H0D6 ABCF1-202ENST00000376545 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.711e-8■■□□□ 13
XRN2Q9H0D6 MKLN1-202ENST00000416992 864 ntTSL 310.58□□□□□ -0.721e-8■■□□□ 13
XRN2Q9H0D6 STARD10-209ENST00000537351 426 ntTSL 39.91□□□□□ -0.821e-8■■□□□ 13
XRN2Q9H0D6 ATP7B-211ENST00000634308 4321 ntTSL 1 (best)9.86□□□□□ -0.831e-8■■□□□ 13
XRN2Q9H0D6 CCT5-213ENST00000515390 1728 ntTSL 2 BASIC9.73□□□□□ -0.851e-8■■□□□ 13
XRN2Q9H0D6 ATP7B-215ENST00000634844 4398 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.891e-8■■□□□ 13
XRN2Q9H0D6 ATP7B-205ENST00000418097 4340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.911e-8■■□□□ 13
XRN2Q9H0D6 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.941e-8■■□□□ 13
XRN2Q9H0D6 CCT5-204ENST00000503454 762 ntTSL 38.93□□□□□ -0.981e-8■■□□□ 13
XRN2Q9H0D6 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.051e-8■■□□□ 13
XRN2Q9H0D6 STARD10-208ENST00000536728 451 ntTSL 57.69□□□□□ -1.181e-8■■□□□ 13
XRN2Q9H0D6 CCT5-208ENST00000510326 567 ntTSL 27.55□□□□□ -1.21e-8■■□□□ 13
XRN2Q9H0D6 CCT5-211ENST00000512975 578 ntTSL 47.29□□□□□ -1.241e-8■■□□□ 13
XRN2Q9H0D6 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC7.25□□□□□ -1.251e-8■■□□□ 13
XRN2Q9H0D6 CCT5-215ENST00000625723 135 ntTSL 5 BASIC7.11□□□□□ -1.271e-8■■□□□ 13
XRN2Q9H0D6 ABCF1-207ENST00000542772 223 ntTSL 36.61□□□□□ -1.351e-8■■□□□ 13
XRN2Q9H0D6 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.851e-8■■□□□ 13
XRN2Q9H0D6 AJUBA-205ENST00000553736 751 ntTSL 224.38■■□□□ 1.494e-7■■□□□ 13
XRN2Q9H0D6 PCM1-209ENST00000518930 575 ntTSL 327.65■■■□□ 2.023e-6■■□□□ 13
XRN2Q9H0D6 EPN2-214ENST00000577244 561 ntTSL 424.7■■□□□ 1.543e-6■■□□□ 13
XRN2Q9H0D6 EPN2-219ENST00000582234 537 ntTSL 424.31■■□□□ 1.483e-6■■□□□ 13
XRN2Q9H0D6 PCM1-210ENST00000518936 710 ntTSL 324.08■■□□□ 1.453e-6■■□□□ 13
XRN2Q9H0D6 EPN2-206ENST00000395628 1657 ntTSL 224.05■■□□□ 1.443e-6■■□□□ 13
XRN2Q9H0D6 EPN2-220ENST00000582659 404 ntTSL 523.03■■□□□ 1.283e-6■■□□□ 13
XRN2Q9H0D6 EPN2-215ENST00000577692 591 ntTSL 423.03■■□□□ 1.283e-6■■□□□ 13
XRN2Q9H0D6 EPN2-216ENST00000580579 569 ntTSL 423.03■■□□□ 1.283e-6■■□□□ 13
XRN2Q9H0D6 EPN2-222ENST00000583197 637 ntTSL 323.03■■□□□ 1.283e-6■■□□□ 13
XRN2Q9H0D6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC22.8■■□□□ 1.243e-6■■□□□ 13
XRN2Q9H0D6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.42■■□□□ 1.183e-6■■□□□ 13
XRN2Q9H0D6 EPN2-208ENST00000494192 959 ntTSL 1 (best)21.43■■□□□ 1.023e-6■■□□□ 13
XRN2Q9H0D6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.84■□□□□ 0.933e-6■■□□□ 13
XRN2Q9H0D6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.873e-6■■□□□ 13
XRN2Q9H0D6 DGKQ-204ENST00000510286 473 ntTSL 319.17■□□□□ 0.663e-6■■□□□ 13
XRN2Q9H0D6 PCM1-218ENST00000523055 1426 ntTSL 1 (best)18.4■□□□□ 0.543e-6■■□□□ 13
XRN2Q9H0D6 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.33■□□□□ 0.523e-6■■□□□ 13
XRN2Q9H0D6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.48■□□□□ 0.393e-6■■□□□ 13
XRN2Q9H0D6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.34■□□□□ 0.373e-6■■□□□ 13
XRN2Q9H0D6 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.293e-6■■□□□ 13
XRN2Q9H0D6 EPN2-218ENST00000582015 562 ntTSL 415.57■□□□□ 0.083e-6■■□□□ 13
XRN2Q9H0D6 PCM1-204ENST00000517730 2536 ntTSL 1 (best)14.55□□□□□ -0.083e-6■■□□□ 13
XRN2Q9H0D6 EPN2-225ENST00000584707 593 ntTSL 414.53□□□□□ -0.083e-6■■□□□ 13
XRN2Q9H0D6 EPN2-217ENST00000581024 639 ntTSL 214.12□□□□□ -0.153e-6■■□□□ 13
XRN2Q9H0D6 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.183e-6■■□□□ 13
XRN2Q9H0D6 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.42□□□□□ -0.263e-6■■□□□ 13
XRN2Q9H0D6 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.363e-6■■□□□ 13
XRN2Q9H0D6 PCM1-203ENST00000517545 3440 ntTSL 1 (best)11.81□□□□□ -0.523e-6■■□□□ 13
XRN2Q9H0D6 EPN2-221ENST00000582969 309 ntTSL 210.43□□□□□ -0.743e-6■■□□□ 13
XRN2Q9H0D6 EPN2-207ENST00000441293 708 ntTSL 39.79□□□□□ -0.843e-6■■□□□ 13
XRN2Q9H0D6 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC8.33□□□□□ -1.083e-6■■□□□ 13
XRN2Q9H0D6 EPN2-224ENST00000584633 546 ntTSL 47.82□□□□□ -1.163e-6■■□□□ 13
XRN2Q9H0D6 NEAT1-202ENST00000501122 22743 ntBASIC4.72□□□□□ -1.654e-11■■□□□ 13
XRN2Q9H0D6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.39■■□□□ 1.021e-6■■□□□ 12.9
XRN2Q9H0D6 SEPT9-215ENST00000586521 601 ntTSL 419.9■□□□□ 0.781e-6■■□□□ 12.9
XRN2Q9H0D6 PLCXD1-208ENST00000445062 555 ntTSL 426.45■■□□□ 1.821e-6■■□□□ 12.9
XRN2Q9H0D6 PLCXD1-205ENST00000429181 469 ntTSL 417.52■□□□□ 0.41e-6■■□□□ 12.9
XRN2Q9H0D6 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.421e-6■■□□□ 12.9
XRN2Q9H0D6 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.38e-7■■□□□ 12.9
XRN2Q9H0D6 TKT-204ENST00000450814 1941 ntTSL 218.77■□□□□ 0.66e-9■■□□□ 12.9
XRN2Q9H0D6 TKT-211ENST00000472528 1055 ntTSL 1 (best)17.45■□□□□ 0.386e-9■■□□□ 12.9
XRN2Q9H0D6 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.84■□□□□ 0.296e-9■■□□□ 12.9
XRN2Q9H0D6 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.01□□□□□ -0.016e-9■■□□□ 12.9
XRN2Q9H0D6 TKT-210ENST00000469678 1871 ntTSL 514.75□□□□□ -0.056e-9■■□□□ 12.9
XRN2Q9H0D6 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.386e-9■■□□□ 12.9
XRN2Q9H0D6 TKT-208ENST00000462138 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.486e-9■■□□□ 12.9
XRN2Q9H0D6 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.086e-13■■□□□ 12.9
XRN2Q9H0D6 SLC17A9-202ENST00000370351 3580 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.366e-13■■□□□ 12.9
XRN2Q9H0D6 SLC17A9-207ENST00000488738 3992 ntTSL 212.7□□□□□ -0.386e-13■■□□□ 12.9
XRN2Q9H0D6 HSF1-206ENST00000528988 775 ntTSL 330.46■■■□□ 2.475e-6■■□□□ 12.9
XRN2Q9H0D6 SH2B3-203ENST00000550925 648 ntTSL 523.51■■□□□ 1.355e-6■■□□□ 12.9
XRN2Q9H0D6 CSNK1D-201ENST00000269361 1088 ntTSL 521.18■□□□□ 0.982e-9■■□□□ 12.9
XRN2Q9H0D6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.78■□□□□ 0.925e-6■■□□□ 12.9
XRN2Q9H0D6 OBSL1-208ENST00000465149 5380 ntTSL 219.8■□□□□ 0.765e-6■■□□□ 12.9
XRN2Q9H0D6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.725e-6■■□□□ 12.9
XRN2Q9H0D6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.695e-6■■□□□ 12.9
XRN2Q9H0D6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.68■□□□□ 0.585e-6■■□□□ 12.9
XRN2Q9H0D6 CSNK1D-222ENST00000584377 2891 ntTSL 213.22□□□□□ -0.292e-9■■□□□ 12.9
XRN2Q9H0D6 TRAP1-216ENST00000576335 645 ntTSL 512.58□□□□□ -0.43e-12■■□□□ 12.9
XRN2Q9H0D6 C16orf70-205ENST00000566026 525 ntTSL 310.25□□□□□ -0.773e-7■■□□□ 12.9
XRN2Q9H0D6 C16orf70-209ENST00000569626 2835 ntTSL 27.02□□□□□ -1.293e-7■■□□□ 12.9
Retrieved 100 of 21,068 protein–RNA pairs in 148.4 ms