Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 TP73-AS1-210ENST00000637775 1455 ntBASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 AC148477.5-201ENST00000625164 1645 ntBASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 VENTXP7-201ENST00000475503 772 ntBASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 LINC01238-205ENST00000567549 1107 ntBASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 PAUPAR-201ENST00000630360 2965 ntBASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.36□□□□□ -0.11
HDHD3Q9BSH5 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 HYMAI-201ENST00000635591 3347 ntBASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 AC005052.1-201ENST00000625181 2492 ntBASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 RCN1P1-201ENST00000400413 996 ntBASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 NUS1P1-201ENST00000446295 882 ntBASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms