Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
NEK1Q96PY6 LINC00895-201ENST00000629028 1637 ntBASIC20.09■□□□□ 0.81
NEK1Q96PY6 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NEK1Q96PY6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NEK1Q96PY6 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
NEK1Q96PY6 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.08■□□□□ 0.81
NEK1Q96PY6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NEK1Q96PY6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NEK1Q96PY6 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NEK1Q96PY6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NEK1Q96PY6 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NEK1Q96PY6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.08■□□□□ 0.81
NEK1Q96PY6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
NEK1Q96PY6 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
NEK1Q96PY6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
NEK1Q96PY6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NEK1Q96PY6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
NEK1Q96PY6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.08■□□□□ 0.81
NEK1Q96PY6 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.08■□□□□ 0.81
NEK1Q96PY6 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.08■□□□□ 0.81
NEK1Q96PY6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
NEK1Q96PY6 MIR1199-201ENST00000621445 119 ntBASIC20.08■□□□□ 0.81
NEK1Q96PY6 REXO1L3P-201ENST00000622202 1288 ntBASIC20.08■□□□□ 0.81
NEK1Q96PY6 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.08■□□□□ 0.81
NEK1Q96PY6 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.08■□□□□ 0.81
NEK1Q96PY6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.08■□□□□ 0.8
NEK1Q96PY6 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NEK1Q96PY6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.08■□□□□ 0.8
NEK1Q96PY6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.08■□□□□ 0.8
NEK1Q96PY6 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.08■□□□□ 0.8
NEK1Q96PY6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NEK1Q96PY6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.08■□□□□ 0.8
NEK1Q96PY6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NEK1Q96PY6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.08■□□□□ 0.8
NEK1Q96PY6 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
NEK1Q96PY6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NEK1Q96PY6 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.07■□□□□ 0.8
NEK1Q96PY6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
NEK1Q96PY6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NEK1Q96PY6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NEK1Q96PY6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NEK1Q96PY6 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
NEK1Q96PY6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.07■□□□□ 0.8
NEK1Q96PY6 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
NEK1Q96PY6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NEK1Q96PY6 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NEK1Q96PY6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NEK1Q96PY6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.07■□□□□ 0.8
NEK1Q96PY6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
NEK1Q96PY6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.07■□□□□ 0.8
NEK1Q96PY6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.07■□□□□ 0.8
NEK1Q96PY6 AC008667.4-201ENST00000607370 168 ntBASIC20.07■□□□□ 0.8
NEK1Q96PY6 GGTLC5P-201ENST00000617623 998 ntBASIC20.07■□□□□ 0.8
NEK1Q96PY6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NEK1Q96PY6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.07■□□□□ 0.8
NEK1Q96PY6 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NEK1Q96PY6 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
NEK1Q96PY6 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.07■□□□□ 0.8
NEK1Q96PY6 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
NEK1Q96PY6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.07■□□□□ 0.8
NEK1Q96PY6 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC20.07■□□□□ 0.8
NEK1Q96PY6 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
NEK1Q96PY6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
NEK1Q96PY6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.06■□□□□ 0.8
NEK1Q96PY6 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
NEK1Q96PY6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.06■□□□□ 0.8
NEK1Q96PY6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.06■□□□□ 0.8
NEK1Q96PY6 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NEK1Q96PY6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NEK1Q96PY6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NEK1Q96PY6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.06■□□□□ 0.8
NEK1Q96PY6 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NEK1Q96PY6 MRPL3P1-201ENST00000400109 1033 ntBASIC20.06■□□□□ 0.8
NEK1Q96PY6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.06■□□□□ 0.8
NEK1Q96PY6 IGHV3-65-201ENST00000523210 341 ntBASIC20.06■□□□□ 0.8
NEK1Q96PY6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NEK1Q96PY6 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.06■□□□□ 0.8
NEK1Q96PY6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.06■□□□□ 0.8
NEK1Q96PY6 AL049840.3-201ENST00000602669 611 ntBASIC20.06■□□□□ 0.8
NEK1Q96PY6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
NEK1Q96PY6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NEK1Q96PY6 AL773604.1-201ENST00000617417 272 ntBASIC20.06■□□□□ 0.8
NEK1Q96PY6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
NEK1Q96PY6 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.06■□□□□ 0.8
NEK1Q96PY6 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
NEK1Q96PY6 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NEK1Q96PY6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NEK1Q96PY6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NEK1Q96PY6 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NEK1Q96PY6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.05■□□□□ 0.8
NEK1Q96PY6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NEK1Q96PY6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NEK1Q96PY6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC20.05■□□□□ 0.8
NEK1Q96PY6 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
NEK1Q96PY6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NEK1Q96PY6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NEK1Q96PY6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NEK1Q96PY6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NEK1Q96PY6 AL031284.1-201ENST00000419297 478 ntBASIC20.05■□□□□ 0.8
NEK1Q96PY6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms