Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC12.9□□□□□ -0.34
AP1S3Q96PC3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 AC009949.1-201ENST00000623048 1830 ntBASIC12.9□□□□□ -0.34
AP1S3Q96PC3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 AC116562.4-202ENST00000641738 218 ntBASIC12.9□□□□□ -0.34
AP1S3Q96PC3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AP1S3Q96PC3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
AP1S3Q96PC3 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.35
AP1S3Q96PC3 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
AP1S3Q96PC3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 LINC00167-201ENST00000530583 1419 ntBASIC12.89□□□□□ -0.35
AP1S3Q96PC3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 AC099063.4-201ENST00000641099 1602 ntBASIC12.89□□□□□ -0.35
AP1S3Q96PC3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 ABHD17AP1-201ENST00000358206 933 ntBASIC12.89□□□□□ -0.35
AP1S3Q96PC3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 KRT18P29-201ENST00000397031 1267 ntBASIC12.89□□□□□ -0.35
AP1S3Q96PC3 AC012618.2-201ENST00000428058 849 ntBASIC12.89□□□□□ -0.35
AP1S3Q96PC3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 CD99P1-205ENST00000527459 561 ntBASIC12.89□□□□□ -0.35
AP1S3Q96PC3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms