Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.18■□□□□ 0.82
DDX11Q96FC9 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DDX11Q96FC9 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX11Q96FC9 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
DDX11Q96FC9 OR6D1P-203ENST00000641209 4860 ntBASIC20.18■□□□□ 0.82
DDX11Q96FC9 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DDX11Q96FC9 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
DDX11Q96FC9 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.18■□□□□ 0.82
DDX11Q96FC9 UBALD1-205ENST00000590891 2641 ntBASIC20.18■□□□□ 0.82
DDX11Q96FC9 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX11Q96FC9 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
DDX11Q96FC9 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.18■□□□□ 0.82
DDX11Q96FC9 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
DDX11Q96FC9 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX11Q96FC9 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX11Q96FC9 AC079328.2-201ENST00000561241 3354 ntBASIC20.17■□□□□ 0.82
DDX11Q96FC9 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX11Q96FC9 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DDX11Q96FC9 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
DDX11Q96FC9 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.17■□□□□ 0.82
DDX11Q96FC9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX11Q96FC9 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.17■□□□□ 0.82
DDX11Q96FC9 KRT18P27-201ENST00000427733 1299 ntBASIC20.17■□□□□ 0.82
DDX11Q96FC9 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.17■□□□□ 0.82
DDX11Q96FC9 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
DDX11Q96FC9 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
DDX11Q96FC9 MIR3687-2-201ENST00000577708 61 ntBASIC20.17■□□□□ 0.82
DDX11Q96FC9 AC010327.4-202ENST00000591484 748 ntBASIC20.17■□□□□ 0.82
DDX11Q96FC9 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.17■□□□□ 0.82
DDX11Q96FC9 MIR3687-1-201ENST00000614492 61 ntBASIC20.17■□□□□ 0.82
DDX11Q96FC9 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX11Q96FC9 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.17■□□□□ 0.82
DDX11Q96FC9 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX11Q96FC9 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX11Q96FC9 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DDX11Q96FC9 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX11Q96FC9 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX11Q96FC9 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DDX11Q96FC9 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.17■□□□□ 0.82
DDX11Q96FC9 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX11Q96FC9 AGGF1P2-201ENST00000426656 2106 ntBASIC20.17■□□□□ 0.82
DDX11Q96FC9 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX11Q96FC9 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DDX11Q96FC9 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.17■□□□□ 0.82
DDX11Q96FC9 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.16■□□□□ 0.82
DDX11Q96FC9 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.16■□□□□ 0.82
DDX11Q96FC9 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX11Q96FC9 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.16■□□□□ 0.82
DDX11Q96FC9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.16■□□□□ 0.82
DDX11Q96FC9 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX11Q96FC9 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX11Q96FC9 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
DDX11Q96FC9 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX11Q96FC9 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.16■□□□□ 0.82
DDX11Q96FC9 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.16■□□□□ 0.82
DDX11Q96FC9 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.16■□□□□ 0.82
DDX11Q96FC9 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DDX11Q96FC9 AC136632.2-201ENST00000512891 861 ntBASIC20.16■□□□□ 0.82
DDX11Q96FC9 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.16■□□□□ 0.82
DDX11Q96FC9 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.16■□□□□ 0.82
DDX11Q96FC9 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.16■□□□□ 0.82
DDX11Q96FC9 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.16■□□□□ 0.82
DDX11Q96FC9 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.16■□□□□ 0.82
DDX11Q96FC9 AL139424.1-201ENST00000607572 797 ntBASIC20.16■□□□□ 0.82
DDX11Q96FC9 AC055717.3-201ENST00000622967 595 ntBASIC20.16■□□□□ 0.82
DDX11Q96FC9 AC105020.1-201ENST00000435356 2205 ntBASIC20.16■□□□□ 0.82
DDX11Q96FC9 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX11Q96FC9 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX11Q96FC9 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
DDX11Q96FC9 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.16■□□□□ 0.82
DDX11Q96FC9 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.16■□□□□ 0.82
DDX11Q96FC9 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DDX11Q96FC9 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.16■□□□□ 0.82
DDX11Q96FC9 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DDX11Q96FC9 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
DDX11Q96FC9 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DDX11Q96FC9 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX11Q96FC9 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX11Q96FC9 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX11Q96FC9 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.15■□□□□ 0.82
DDX11Q96FC9 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX11Q96FC9 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC20.15■□□□□ 0.82
DDX11Q96FC9 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX11Q96FC9 AC073621.1-201ENST00000392730 636 ntBASIC20.15■□□□□ 0.82
DDX11Q96FC9 YBX2P1-201ENST00000394192 760 ntBASIC20.15■□□□□ 0.82
DDX11Q96FC9 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
DDX11Q96FC9 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
DDX11Q96FC9 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.15■□□□□ 0.82
DDX11Q96FC9 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.15■□□□□ 0.82
DDX11Q96FC9 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.15■□□□□ 0.82
DDX11Q96FC9 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.15■□□□□ 0.82
DDX11Q96FC9 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX11Q96FC9 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.15■□□□□ 0.82
DDX11Q96FC9 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.15■□□□□ 0.82
DDX11Q96FC9 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.15■□□□□ 0.82
DDX11Q96FC9 AL589182.2-201ENST00000619332 1049 ntBASIC20.15■□□□□ 0.82
DDX11Q96FC9 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.15■□□□□ 0.82
DDX11Q96FC9 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DDX11Q96FC9 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.15■□□□□ 0.82
DDX11Q96FC9 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms