Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.72■□□□□ 0.11
CT55Q8WUE5 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.72■□□□□ 0.11
CT55Q8WUE5 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CT55Q8WUE5 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CT55Q8WUE5 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CT55Q8WUE5 GNAS-203ENST00000306120 1878 ntBASIC15.72■□□□□ 0.11
CT55Q8WUE5 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CT55Q8WUE5 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.72■□□□□ 0.11
CT55Q8WUE5 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.72■□□□□ 0.11
CT55Q8WUE5 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CT55Q8WUE5 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CT55Q8WUE5 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CT55Q8WUE5 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.72■□□□□ 0.11
CT55Q8WUE5 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CT55Q8WUE5 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.72■□□□□ 0.11
CT55Q8WUE5 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CT55Q8WUE5 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
CT55Q8WUE5 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.72■□□□□ 0.11
CT55Q8WUE5 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CT55Q8WUE5 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CT55Q8WUE5 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.72■□□□□ 0.11
CT55Q8WUE5 AL138918.1-201ENST00000568306 659 ntBASIC15.72■□□□□ 0.11
CT55Q8WUE5 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CT55Q8WUE5 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CT55Q8WUE5 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CT55Q8WUE5 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.72■□□□□ 0.11
CT55Q8WUE5 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.72■□□□□ 0.11
CT55Q8WUE5 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CT55Q8WUE5 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CT55Q8WUE5 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CT55Q8WUE5 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CT55Q8WUE5 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CT55Q8WUE5 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.72■□□□□ 0.11
CT55Q8WUE5 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CT55Q8WUE5 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CT55Q8WUE5 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CT55Q8WUE5 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CT55Q8WUE5 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CT55Q8WUE5 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CT55Q8WUE5 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CT55Q8WUE5 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
CT55Q8WUE5 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CT55Q8WUE5 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CT55Q8WUE5 LINC00896-202ENST00000609602 2128 ntBASIC15.71■□□□□ 0.11
CT55Q8WUE5 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CT55Q8WUE5 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.71■□□□□ 0.11
CT55Q8WUE5 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.71■□□□□ 0.11
CT55Q8WUE5 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CT55Q8WUE5 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CT55Q8WUE5 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.71■□□□□ 0.11
CT55Q8WUE5 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CT55Q8WUE5 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CT55Q8WUE5 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.71■□□□□ 0.11
CT55Q8WUE5 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CT55Q8WUE5 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
CT55Q8WUE5 MIR346-201ENST00000362234 95 ntBASIC15.71■□□□□ 0.11
CT55Q8WUE5 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.71■□□□□ 0.11
CT55Q8WUE5 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CT55Q8WUE5 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.71■□□□□ 0.11
CT55Q8WUE5 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CT55Q8WUE5 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.71■□□□□ 0.11
CT55Q8WUE5 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.71■□□□□ 0.11
CT55Q8WUE5 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.71■□□□□ 0.11
CT55Q8WUE5 AL390754.1-201ENST00000619088 582 ntBASIC15.71■□□□□ 0.11
CT55Q8WUE5 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CT55Q8WUE5 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.71■□□□□ 0.11
CT55Q8WUE5 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.71■□□□□ 0.11
CT55Q8WUE5 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.71■□□□□ 0.11
CT55Q8WUE5 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CT55Q8WUE5 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CT55Q8WUE5 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CT55Q8WUE5 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
CT55Q8WUE5 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
CT55Q8WUE5 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.71■□□□□ 0.1
CT55Q8WUE5 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CT55Q8WUE5 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CT55Q8WUE5 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CT55Q8WUE5 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.7■□□□□ 0.1
CT55Q8WUE5 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
CT55Q8WUE5 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
CT55Q8WUE5 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CT55Q8WUE5 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CT55Q8WUE5 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CT55Q8WUE5 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CT55Q8WUE5 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.7■□□□□ 0.1
CT55Q8WUE5 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CT55Q8WUE5 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CT55Q8WUE5 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CT55Q8WUE5 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.7■□□□□ 0.1
CT55Q8WUE5 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.7■□□□□ 0.1
CT55Q8WUE5 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.7■□□□□ 0.1
CT55Q8WUE5 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.7■□□□□ 0.1
CT55Q8WUE5 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CT55Q8WUE5 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.7■□□□□ 0.1
CT55Q8WUE5 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.7■□□□□ 0.1
CT55Q8WUE5 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CT55Q8WUE5 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.7■□□□□ 0.1
CT55Q8WUE5 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CT55Q8WUE5 MIR4492-201ENST00000581627 80 ntBASIC15.7■□□□□ 0.1
CT55Q8WUE5 AC021097.1-201ENST00000607902 574 ntBASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms