Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK4Q8NE63 SLC25A1P3-201ENST00000395415 828 ntBASIC16.56■□□□□ 0.24
HIPK4Q8NE63 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK4Q8NE63 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.56■□□□□ 0.24
HIPK4Q8NE63 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK4Q8NE63 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
HIPK4Q8NE63 AC009154.2-201ENST00000621177 724 ntBASIC16.56■□□□□ 0.24
HIPK4Q8NE63 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK4Q8NE63 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK4Q8NE63 AL136379.1-201ENST00000623471 2642 ntBASIC16.56■□□□□ 0.24
HIPK4Q8NE63 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK4Q8NE63 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK4Q8NE63 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK4Q8NE63 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.56■□□□□ 0.24
HIPK4Q8NE63 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 BX276092.7-203ENST00000637198 1536 ntBASIC16.55■□□□□ 0.24
HIPK4Q8NE63 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 AC140113.3-201ENST00000605663 199 ntBASIC16.55■□□□□ 0.24
HIPK4Q8NE63 AL139327.4-201ENST00000612362 153 ntBASIC16.55■□□□□ 0.24
HIPK4Q8NE63 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.55■□□□□ 0.24
HIPK4Q8NE63 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 AL023973.1-201ENST00000624619 620 ntBASIC16.55■□□□□ 0.24
HIPK4Q8NE63 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.55■□□□□ 0.24
HIPK4Q8NE63 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 TSPY12P-201ENST00000421279 868 ntBASIC16.54■□□□□ 0.24
HIPK4Q8NE63 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 KRT18P48-201ENST00000434763 852 ntBASIC16.54■□□□□ 0.24
HIPK4Q8NE63 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 AC079602.3-201ENST00000623931 403 ntBASIC16.54■□□□□ 0.24
HIPK4Q8NE63 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK4Q8NE63 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms