Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC50Q8IVM0 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.99■□□□□ 0.47
CCDC50Q8IVM0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC50Q8IVM0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC50Q8IVM0 LINC00265-3P-201ENST00000447588 903 ntBASIC17.99■□□□□ 0.47
CCDC50Q8IVM0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC50Q8IVM0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.99■□□□□ 0.47
CCDC50Q8IVM0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC50Q8IVM0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
CCDC50Q8IVM0 AP002414.4-201ENST00000589764 1148 ntBASIC17.99■□□□□ 0.47
CCDC50Q8IVM0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC50Q8IVM0 AC116407.4-201ENST00000623319 1061 ntBASIC17.99■□□□□ 0.47
CCDC50Q8IVM0 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC50Q8IVM0 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC50Q8IVM0 IER3-202ENST00000376377 1350 ntBASIC17.99■□□□□ 0.47
CCDC50Q8IVM0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC50Q8IVM0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC50Q8IVM0 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC50Q8IVM0 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC50Q8IVM0 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC50Q8IVM0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC50Q8IVM0 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC50Q8IVM0 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC50Q8IVM0 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC50Q8IVM0 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
CCDC50Q8IVM0 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
CCDC50Q8IVM0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC50Q8IVM0 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC50Q8IVM0 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC50Q8IVM0 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC50Q8IVM0 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 TPSP2-201ENST00000561760 610 ntBASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 AD001527.2-201ENST00000622994 785 ntBASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC50Q8IVM0 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 DRAXINP1-201ENST00000437611 948 ntBASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 KRT17P6-201ENST00000453795 1220 ntBASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 NSUN5P1-202ENST00000421140 1535 ntBASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 NSUN5P2-203ENST00000457352 1529 ntBASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms