Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNGA4Q8IV77 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 KRT18P57-201ENST00000443599 1254 ntBASIC18.46■□□□□ 0.55
CNGA4Q8IV77 VENTXP7-201ENST00000475503 772 ntBASIC18.46■□□□□ 0.55
CNGA4Q8IV77 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 AC093827.2-201ENST00000512654 315 ntBASIC18.46■□□□□ 0.55
CNGA4Q8IV77 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNGA4Q8IV77 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.46■□□□□ 0.54
CNGA4Q8IV77 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CNGA4Q8IV77 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNGA4Q8IV77 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CNGA4Q8IV77 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNGA4Q8IV77 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CNGA4Q8IV77 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CNGA4Q8IV77 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CNGA4Q8IV77 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNGA4Q8IV77 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNGA4Q8IV77 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
CNGA4Q8IV77 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CNGA4Q8IV77 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNGA4Q8IV77 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CNGA4Q8IV77 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.45■□□□□ 0.54
CNGA4Q8IV77 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.45■□□□□ 0.54
CNGA4Q8IV77 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CNGA4Q8IV77 AL671277.2-201ENST00000458060 996 ntBASIC18.45■□□□□ 0.54
CNGA4Q8IV77 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.45■□□□□ 0.54
CNGA4Q8IV77 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CNGA4Q8IV77 AC011498.5-201ENST00000592027 486 ntBASIC18.45■□□□□ 0.54
CNGA4Q8IV77 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CNGA4Q8IV77 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.45■□□□□ 0.54
CNGA4Q8IV77 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.45■□□□□ 0.54
CNGA4Q8IV77 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
CNGA4Q8IV77 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNGA4Q8IV77 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CNGA4Q8IV77 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNGA4Q8IV77 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNGA4Q8IV77 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
CNGA4Q8IV77 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNGA4Q8IV77 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.45■□□□□ 0.54
CNGA4Q8IV77 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNGA4Q8IV77 AC105917.1-201ENST00000506637 2539 ntBASIC18.45■□□□□ 0.54
CNGA4Q8IV77 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNGA4Q8IV77 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNGA4Q8IV77 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CNGA4Q8IV77 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms