Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 ALDH18A1-202ENST00000371224 3359 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.614e-7■□□□□ 8.1
LARP4Q71RC2 ALDH18A1-201ENST00000371221 3337 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.664e-7■□□□□ 8.1
LARP4Q71RC2 XRCC6-208ENST00000478914 550 ntTSL 27.97□□□□□ -1.134e-7■□□□□ 8.1
LARP4Q71RC2 VTI1B-206ENST00000556461 576 ntTSL 27.4□□□□□ -1.224e-7■□□□□ 8.1
LARP4Q71RC2 VTI1B-203ENST00000554636 565 ntTSL 34.74□□□□□ -1.654e-7■□□□□ 8.1
LARP4Q71RC2 RPL32-207ENST00000452606 631 ntTSL 25.58□□□□□ -1.527e-23■□□□□ 8.1
LARP4Q71RC2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.35■□□□□ 0.854e-17■□□□□ 8.1
LARP4Q71RC2 PPP1R15A-202ENST00000600406 1725 nt15.75■□□□□ 0.114e-13■□□□□ 8.1
LARP4Q71RC2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.14e-13■□□□□ 8.1
LARP4Q71RC2 PTMA-210ENST00000467816 378 ntTSL 212.88□□□□□ -0.354e-17■□□□□ 8.1
LARP4Q71RC2 PTMA-211ENST00000468027 621 ntTSL 1 (best)11.89□□□□□ -0.514e-17■□□□□ 8.1
LARP4Q71RC2 HNRNPU-210ENST00000483966 1069 ntTSL 24.79□□□□□ -1.643e-25■□□□□ 8.1
LARP4Q71RC2 STARD10-210ENST00000537947 1100 ntTSL 323.86■■□□□ 1.412e-8■□□□□ 8.1
LARP4Q71RC2 STARD10-205ENST00000535267 579 ntTSL 223.65■■□□□ 1.382e-8■□□□□ 8.1
LARP4Q71RC2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.35■■□□□ 1.332e-8■□□□□ 8.1
LARP4Q71RC2 STARD10-203ENST00000535054 460 ntTSL 322.79■■□□□ 1.242e-8■□□□□ 8.1
LARP4Q71RC2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.782e-8■□□□□ 8.1
LARP4Q71RC2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.51■□□□□ 0.712e-8■□□□□ 8.1
LARP4Q71RC2 STARD10-216ENST00000542989 839 ntTSL 318.88■□□□□ 0.612e-8■□□□□ 8.1
LARP4Q71RC2 STARD10-212ENST00000538437 747 ntTSL 218.24■□□□□ 0.512e-8■□□□□ 8.1
LARP4Q71RC2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.472e-8■□□□□ 8.1
LARP4Q71RC2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.372e-8■□□□□ 8.1
LARP4Q71RC2 STARD10-206ENST00000536290 438 ntTSL 515.73■□□□□ 0.112e-8■□□□□ 8.1
LARP4Q71RC2 STARD10-214ENST00000539138 511 ntTSL 315.58■□□□□ 0.082e-8■□□□□ 8.1
LARP4Q71RC2 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.012e-8■□□□□ 8.1
LARP4Q71RC2 STARD10-211ENST00000538009 985 ntTSL 1 (best)14.71□□□□□ -0.052e-8■□□□□ 8.1
LARP4Q71RC2 STARD10-221ENST00000546314 620 ntTSL 314.54□□□□□ -0.082e-8■□□□□ 8.1
LARP4Q71RC2 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.342e-8■□□□□ 8.1
LARP4Q71RC2 STARD10-207ENST00000536377 798 ntTSL 512.85□□□□□ -0.352e-8■□□□□ 8.1
LARP4Q71RC2 NDUFC1-208ENST00000513022 564 ntTSL 412.42□□□□□ -0.422e-8■□□□□ 8.1
LARP4Q71RC2 SRRM2-216ENST00000573583 543 ntTSL 410.35□□□□□ -0.752e-8■□□□□ 8.1
LARP4Q71RC2 UBE2N-205ENST00000550657 3018 ntTSL 2 BASIC9.18□□□□□ -0.942e-8■□□□□ 8.1
LARP4Q71RC2 SPCS1-203ENST00000448693 826 ntTSL 29.02□□□□□ -0.972e-8■□□□□ 8.1
LARP4Q71RC2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.432e-7■□□□□ 8.1
LARP4Q71RC2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.75■□□□□ 0.272e-7■□□□□ 8.1
LARP4Q71RC2 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.042e-7■□□□□ 8.1
LARP4Q71RC2 FAM234A-201ENST00000301678 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.532e-7■□□□□ 8.1
LARP4Q71RC2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.322e-9■□□□□ 8.1
LARP4Q71RC2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.14■□□□□ 0.662e-9■□□□□ 8.1
LARP4Q71RC2 KRT18-206ENST00000549078 2088 ntTSL 518.7■□□□□ 0.582e-9■□□□□ 8.1
LARP4Q71RC2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.532e-9■□□□□ 8.1
LARP4Q71RC2 IFRD2-210ENST00000474556 1812 ntTSL 516.37■□□□□ 0.212e-9■□□□□ 8.1
LARP4Q71RC2 KRT18-205ENST00000548496 695 ntTSL 211.29□□□□□ -0.62e-9■□□□□ 8.1
LARP4Q71RC2 GTF3C1-211ENST00000569653 897 ntTSL 212.55□□□□□ -0.41e-8■□□□□ 8.1
LARP4Q71RC2 BAG6-250ENST00000451898 993 ntTSL 317.09■□□□□ 0.336e-12■□□□□ 8.1
LARP4Q71RC2 BAG6-248ENST00000441054 654 ntTSL 316.37■□□□□ 0.216e-12■□□□□ 8.1
LARP4Q71RC2 BAG6-245ENST00000437771 2407 ntTSL 515.61■□□□□ 0.096e-12■□□□□ 8.1
LARP4Q71RC2 BAG6-240ENST00000424480 1056 ntTSL 215.19■□□□□ 0.026e-12■□□□□ 8.1
LARP4Q71RC2 BAG6-244ENST00000435080 1710 ntTSL 514.05□□□□□ -0.166e-12■□□□□ 8.1
LARP4Q71RC2 BAG6-255ENST00000456622 859 ntTSL 511.41□□□□□ -0.586e-12■□□□□ 8.1
LARP4Q71RC2 BAG6-239ENST00000424176 747 ntTSL 310.77□□□□□ -0.696e-12■□□□□ 8.1
LARP4Q71RC2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.691e-10■□□□□ 8.1
LARP4Q71RC2 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.622e-6■□□□□ 8.1
LARP4Q71RC2 GPX4-211ENST00000614791 431 ntTSL 321.45■■□□□ 1.025e-19■□□□□ 8.1
LARP4Q71RC2 RPL22-206ENST00000480661 2279 ntTSL 1 (best)20.09■□□□□ 0.817e-12■□□□□ 8.1
LARP4Q71RC2 RPL22-204ENST00000465387 508 ntTSL 219.82■□□□□ 0.767e-12■□□□□ 8.1
LARP4Q71RC2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.43■□□□□ 0.72e-6■□□□□ 8.1
LARP4Q71RC2 ETFA-215ENST00000560595 917 ntTSL 1 (best)18.92■□□□□ 0.622e-6■□□□□ 8.1
LARP4Q71RC2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.94■□□□□ 0.32e-6■□□□□ 8.1
LARP4Q71RC2 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.94■□□□□ 0.141e-10■□□□□ 8.1
LARP4Q71RC2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.81■□□□□ 0.122e-6■□□□□ 8.1
LARP4Q71RC2 RPS27-204ENST00000493224 573 ntTSL 215.56■□□□□ 0.082e-15■□□□□ 8.1
LARP4Q71RC2 HM13-219ENST00000487964 902 ntTSL 515.23■□□□□ 0.033e-8■□□□□ 8.1
LARP4Q71RC2 RPL22-203ENST00000465335 806 ntTSL 315.14■□□□□ 0.017e-12■□□□□ 8.1
LARP4Q71RC2 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.061e-10■□□□□ 8.1
LARP4Q71RC2 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.12e-6■□□□□ 8.1
LARP4Q71RC2 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.4□□□□□ -0.11e-10■□□□□ 8.1
LARP4Q71RC2 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.03□□□□□ -0.162e-6■□□□□ 8.1
LARP4Q71RC2 SLC26A6-220ENST00000489483 5682 ntTSL 214.02□□□□□ -0.172e-6■□□□□ 8.1
LARP4Q71RC2 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.22e-6■□□□□ 8.1
LARP4Q71RC2 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.231e-10■□□□□ 8.1
LARP4Q71RC2 HM13-213ENST00000469126 756 ntTSL 513.56□□□□□ -0.243e-8■□□□□ 8.1
LARP4Q71RC2 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.5□□□□□ -0.252e-6■□□□□ 8.1
LARP4Q71RC2 LRP10-205ENST00000553002 1065 ntTSL 213.34□□□□□ -0.275e-7■□□□□ 8.1
LARP4Q71RC2 SLC26A6-201ENST00000307364 2586 ntTSL 1 (best)13.15□□□□□ -0.32e-6■□□□□ 8.1
LARP4Q71RC2 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC13□□□□□ -0.332e-6■□□□□ 8.1
LARP4Q71RC2 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC12.9□□□□□ -0.342e-6■□□□□ 8.1
LARP4Q71RC2 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.352e-6■□□□□ 8.1
LARP4Q71RC2 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC12.87□□□□□ -0.352e-6■□□□□ 8.1
LARP4Q71RC2 FAM234A-209ENST00000424016 646 ntTSL 312.65□□□□□ -0.385e-7■□□□□ 8.1
LARP4Q71RC2 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.392e-6■□□□□ 8.1
LARP4Q71RC2 SLC26A6-217ENST00000480524 2727 ntTSL 1 (best)12.56□□□□□ -0.42e-6■□□□□ 8.1
LARP4Q71RC2 RPL22-201ENST00000234875 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.667e-12■□□□□ 8.1
LARP4Q71RC2 RPS27-203ENST00000477151 467 ntTSL 210.59□□□□□ -0.712e-15■□□□□ 8.1
LARP4Q71RC2 PTPRA-203ENST00000356147 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.782e-6■□□□□ 8.1
LARP4Q71RC2 PPP1R11-202ENST00000376763 1464 ntTSL 3 BASIC9.9□□□□□ -0.832e-6■□□□□ 8.1
LARP4Q71RC2 PTPRA-202ENST00000318266 3219 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.862e-6■□□□□ 8.1
LARP4Q71RC2 HM13-215ENST00000474466 440 ntTSL 39.54□□□□□ -0.883e-8■□□□□ 8.1
LARP4Q71RC2 LSS-203ENST00000419093 517 ntTSL 39.41□□□□□ -0.91e-10■□□□□ 8.1
LARP4Q71RC2 HM13-214ENST00000472128 865 ntTSL 59.2□□□□□ -0.943e-8■□□□□ 8.1
LARP4Q71RC2 RPS27-202ENST00000392558 625 ntTSL 2 BASIC9.05□□□□□ -0.962e-15■□□□□ 8.1
LARP4Q71RC2 PTPRA-204ENST00000380393 3636 ntTSL 1 (best) BASIC8.94□□□□□ -0.982e-6■□□□□ 8.1
LARP4Q71RC2 RPL22-207ENST00000484532 449 ntTSL 2 BASIC8.67□□□□□ -1.027e-12■□□□□ 8.1
LARP4Q71RC2 PPP1R11-203ENST00000376765 1536 ntTSL 3 BASIC8.64□□□□□ -1.032e-6■□□□□ 8.1
LARP4Q71RC2 RPL32-205ENST00000434963 439 ntTSL 58.42□□□□□ -1.061e-22■□□□□ 8.1
LARP4Q71RC2 RPL22-202ENST00000462296 600 ntTSL 37.76□□□□□ -1.177e-12■□□□□ 8.1
LARP4Q71RC2 RPL22-208ENST00000497965 786 ntTSL 2 BASIC7.37□□□□□ -1.237e-12■□□□□ 8.1
LARP4Q71RC2 ETFA-210ENST00000559973 804 ntTSL 37.25□□□□□ -1.252e-6■□□□□ 8.1
LARP4Q71RC2 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.65□□□□□ -1.342e-6■□□□□ 8.1
LARP4Q71RC2 PSMB4-202ENST00000466425 665 ntTSL 26.51□□□□□ -1.373e-8■□□□□ 8.1
Retrieved 100 of 15,922 protein–RNA pairs in 302.3 ms