Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.52□□□□□ -0.08
LRRK2Q5S007 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRRK2Q5S007 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.52□□□□□ -0.08
LRRK2Q5S007 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRRK2Q5S007 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.52□□□□□ -0.08
LRRK2Q5S007 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.52□□□□□ -0.08
LRRK2Q5S007 PRYP6-201ENST00000514804 343 ntBASIC14.52□□□□□ -0.08
LRRK2Q5S007 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
LRRK2Q5S007 AC016629.1-201ENST00000596579 586 ntBASIC14.52□□□□□ -0.08
LRRK2Q5S007 AL365330.1-201ENST00000607459 531 ntBASIC14.52□□□□□ -0.08
LRRK2Q5S007 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.52□□□□□ -0.08
LRRK2Q5S007 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRRK2Q5S007 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRRK2Q5S007 CROCCP3-202ENST00000420820 1947 ntBASIC14.52□□□□□ -0.08
LRRK2Q5S007 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRRK2Q5S007 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
LRRK2Q5S007 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC14.52□□□□□ -0.09
LRRK2Q5S007 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRK2Q5S007 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRK2Q5S007 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.52□□□□□ -0.09
LRRK2Q5S007 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.52□□□□□ -0.09
LRRK2Q5S007 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.52□□□□□ -0.09
LRRK2Q5S007 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRRK2Q5S007 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.52□□□□□ -0.09
LRRK2Q5S007 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.52□□□□□ -0.09
LRRK2Q5S007 AC006033.1-201ENST00000440505 426 ntBASIC14.52□□□□□ -0.09
LRRK2Q5S007 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.52□□□□□ -0.09
LRRK2Q5S007 RPS2P36-201ENST00000456516 831 ntBASIC14.52□□□□□ -0.09
LRRK2Q5S007 AC108725.1-201ENST00000495472 409 ntBASIC14.52□□□□□ -0.09
LRRK2Q5S007 SDHAP3-202ENST00000515467 728 ntBASIC14.52□□□□□ -0.09
LRRK2Q5S007 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.52□□□□□ -0.09
LRRK2Q5S007 AC233724.13-201ENST00000598383 410 ntBASIC14.52□□□□□ -0.09
LRRK2Q5S007 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.52□□□□□ -0.09
LRRK2Q5S007 AC009542.2-202ENST00000619004 1067 ntBASIC14.52□□□□□ -0.09
LRRK2Q5S007 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRK2Q5S007 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRK2Q5S007 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRK2Q5S007 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
LRRK2Q5S007 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRK2Q5S007 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRK2Q5S007 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRK2Q5S007 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRK2Q5S007 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRK2Q5S007 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRK2Q5S007 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.51□□□□□ -0.09
LRRK2Q5S007 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRK2Q5S007 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
LRRK2Q5S007 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
LRRK2Q5S007 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRK2Q5S007 AC253536.4-201ENST00000440539 267 ntBASIC14.51□□□□□ -0.09
LRRK2Q5S007 TMEM198B-204ENST00000484016 896 ntBASIC14.51□□□□□ -0.09
LRRK2Q5S007 AC123567.1-201ENST00000548294 1261 ntBASIC14.51□□□□□ -0.09
LRRK2Q5S007 C2orf69P2-201ENST00000562032 1123 ntBASIC14.51□□□□□ -0.09
LRRK2Q5S007 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.51□□□□□ -0.09
LRRK2Q5S007 AC026740.1-201ENST00000607068 791 ntBASIC14.51□□□□□ -0.09
LRRK2Q5S007 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRK2Q5S007 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRK2Q5S007 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
LRRK2Q5S007 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRK2Q5S007 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.51□□□□□ -0.09
LRRK2Q5S007 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.51□□□□□ -0.09
LRRK2Q5S007 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRK2Q5S007 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.51□□□□□ -0.09
LRRK2Q5S007 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRK2Q5S007 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRK2Q5S007 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRK2Q5S007 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
LRRK2Q5S007 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRK2Q5S007 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRK2Q5S007 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LRRK2Q5S007 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.51□□□□□ -0.09
LRRK2Q5S007 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRK2Q5S007 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRK2Q5S007 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRK2Q5S007 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRK2Q5S007 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRK2Q5S007 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRK2Q5S007 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRK2Q5S007 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRK2Q5S007 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.51□□□□□ -0.09
LRRK2Q5S007 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.51□□□□□ -0.09
LRRK2Q5S007 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.51□□□□□ -0.09
LRRK2Q5S007 MIR4722-201ENST00000578292 60 ntBASIC14.51□□□□□ -0.09
LRRK2Q5S007 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.51□□□□□ -0.09
LRRK2Q5S007 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LRRK2Q5S007 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRK2Q5S007 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRK2Q5S007 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRK2Q5S007 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRK2Q5S007 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRK2Q5S007 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRK2Q5S007 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRK2Q5S007 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.5□□□□□ -0.09
LRRK2Q5S007 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
LRRK2Q5S007 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LRRK2Q5S007 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRRK2Q5S007 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRK2Q5S007 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRRK2Q5S007 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRK2Q5S007 AC005229.1-201ENST00000392885 409 ntBASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms