Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SGO1Q5FBB7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SGO1Q5FBB7 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SGO1Q5FBB7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SGO1Q5FBB7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SGO1Q5FBB7 AC078925.2-201ENST00000624013 1973 ntBASIC16.55■□□□□ 0.24
SGO1Q5FBB7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SGO1Q5FBB7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SGO1Q5FBB7 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SGO1Q5FBB7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SGO1Q5FBB7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SGO1Q5FBB7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.55■□□□□ 0.24
SGO1Q5FBB7 UPK3BP1-201ENST00000428678 509 ntBASIC16.55■□□□□ 0.24
SGO1Q5FBB7 NUS1P1-201ENST00000446295 882 ntBASIC16.55■□□□□ 0.24
SGO1Q5FBB7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SGO1Q5FBB7 AC132008.2-207ENST00000454517 770 ntBASIC16.55■□□□□ 0.24
SGO1Q5FBB7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.55■□□□□ 0.24
SGO1Q5FBB7 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.55■□□□□ 0.24
SGO1Q5FBB7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.55■□□□□ 0.24
SGO1Q5FBB7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.55■□□□□ 0.24
SGO1Q5FBB7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.55■□□□□ 0.24
SGO1Q5FBB7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SGO1Q5FBB7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SGO1Q5FBB7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SGO1Q5FBB7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SGO1Q5FBB7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.55■□□□□ 0.24
SGO1Q5FBB7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SGO1Q5FBB7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SGO1Q5FBB7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SGO1Q5FBB7 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 BX005266.1-201ENST00000473402 457 ntBASIC16.53■□□□□ 0.24
SGO1Q5FBB7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 AL732292.2-201ENST00000609649 430 ntBASIC16.53■□□□□ 0.24
SGO1Q5FBB7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 PCDHB19P-201ENST00000570871 2371 ntBASIC16.53■□□□□ 0.24
SGO1Q5FBB7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms