Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.75■□□□□ 0.75
IRX3P78415 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
IRX3P78415 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
IRX3P78415 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
IRX3P78415 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
IRX3P78415 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IRX3P78415 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IRX3P78415 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IRX3P78415 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IRX3P78415 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
IRX3P78415 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IRX3P78415 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IRX3P78415 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
IRX3P78415 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
IRX3P78415 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
IRX3P78415 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IRX3P78415 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IRX3P78415 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IRX3P78415 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
IRX3P78415 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.74■□□□□ 0.75
IRX3P78415 AC093214.1-201ENST00000511688 1107 ntBASIC19.74■□□□□ 0.75
IRX3P78415 RNA5SP421-201ENST00000516864 134 ntBASIC19.74■□□□□ 0.75
IRX3P78415 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.74■□□□□ 0.75
IRX3P78415 DUX4L27-201ENST00000554796 1261 ntBASIC19.74■□□□□ 0.75
IRX3P78415 AL135744.1-201ENST00000565098 629 ntBASIC19.74■□□□□ 0.75
IRX3P78415 RARRES2P8-201ENST00000566335 367 ntBASIC19.74■□□□□ 0.75
IRX3P78415 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.74■□□□□ 0.75
IRX3P78415 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IRX3P78415 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IRX3P78415 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
IRX3P78415 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
IRX3P78415 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IRX3P78415 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
IRX3P78415 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.74■□□□□ 0.75
IRX3P78415 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IRX3P78415 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.74■□□□□ 0.75
IRX3P78415 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
IRX3P78415 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
IRX3P78415 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IRX3P78415 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IRX3P78415 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
IRX3P78415 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IRX3P78415 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IRX3P78415 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.73■□□□□ 0.75
IRX3P78415 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IRX3P78415 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
IRX3P78415 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.73■□□□□ 0.75
IRX3P78415 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
IRX3P78415 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IRX3P78415 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
IRX3P78415 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
IRX3P78415 AC069335.1-201ENST00000489972 472 ntBASIC19.73■□□□□ 0.75
IRX3P78415 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.73■□□□□ 0.75
IRX3P78415 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.73■□□□□ 0.75
IRX3P78415 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.73■□□□□ 0.75
IRX3P78415 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.73■□□□□ 0.75
IRX3P78415 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.73■□□□□ 0.75
IRX3P78415 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
IRX3P78415 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.73■□□□□ 0.75
IRX3P78415 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
IRX3P78415 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
IRX3P78415 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IRX3P78415 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IRX3P78415 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.73■□□□□ 0.75
IRX3P78415 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.73■□□□□ 0.75
IRX3P78415 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.73■□□□□ 0.75
IRX3P78415 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
IRX3P78415 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IRX3P78415 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
IRX3P78415 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
IRX3P78415 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
IRX3P78415 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IRX3P78415 AKAP8P1-201ENST00000434743 1349 ntBASIC19.73■□□□□ 0.75
IRX3P78415 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.73■□□□□ 0.75
IRX3P78415 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
IRX3P78415 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IRX3P78415 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
IRX3P78415 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
IRX3P78415 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
IRX3P78415 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IRX3P78415 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.72■□□□□ 0.75
IRX3P78415 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.72■□□□□ 0.75
IRX3P78415 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
IRX3P78415 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IRX3P78415 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
IRX3P78415 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
IRX3P78415 PMS2P4-201ENST00000412466 1052 ntBASIC19.72■□□□□ 0.75
IRX3P78415 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.72■□□□□ 0.75
IRX3P78415 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.72■□□□□ 0.75
IRX3P78415 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IRX3P78415 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.72■□□□□ 0.75
IRX3P78415 AC069262.1-201ENST00000539058 672 ntBASIC19.72■□□□□ 0.75
IRX3P78415 AC243562.1-201ENST00000560672 389 ntBASIC19.72■□□□□ 0.75
IRX3P78415 AL390955.2-201ENST00000603032 514 ntBASIC19.72■□□□□ 0.75
IRX3P78415 AC239800.4-201ENST00000603712 296 ntBASIC19.72■□□□□ 0.75
IRX3P78415 AL161645.1-201ENST00000622716 1255 ntBASIC19.72■□□□□ 0.75
IRX3P78415 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.72■□□□□ 0.75
IRX3P78415 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
IRX3P78415 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
IRX3P78415 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms