Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PAX9P55771 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
PAX9P55771 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
PAX9P55771 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PAX9P55771 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PAX9P55771 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
PAX9P55771 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
PAX9P55771 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PAX9P55771 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.65□□□□□ -0.22
PAX9P55771 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
PAX9P55771 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PAX9P55771 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
PAX9P55771 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.65□□□□□ -0.22
PAX9P55771 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PAX9P55771 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PAX9P55771 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PAX9P55771 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
PAX9P55771 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PAX9P55771 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC13.65□□□□□ -0.22
PAX9P55771 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PAX9P55771 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.65□□□□□ -0.22
PAX9P55771 AC087499.1-201ENST00000418141 1075 ntBASIC13.65□□□□□ -0.22
PAX9P55771 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.65□□□□□ -0.22
PAX9P55771 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.65□□□□□ -0.22
PAX9P55771 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC13.65□□□□□ -0.22
PAX9P55771 TMA16-209ENST00000513272 803 ntTSL 2 BASIC13.65□□□□□ -0.22
PAX9P55771 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
PAX9P55771 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC13.65□□□□□ -0.22
PAX9P55771 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC13.65□□□□□ -0.22
PAX9P55771 AC073912.3-201ENST00000624414 853 ntBASIC13.65□□□□□ -0.22
PAX9P55771 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PAX9P55771 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PAX9P55771 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PAX9P55771 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PAX9P55771 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PAX9P55771 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC13.65□□□□□ -0.22
PAX9P55771 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
PAX9P55771 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.65□□□□□ -0.22
PAX9P55771 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PAX9P55771 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.65□□□□□ -0.22
PAX9P55771 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PAX9P55771 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
PAX9P55771 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PAX9P55771 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.65□□□□□ -0.22
PAX9P55771 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PAX9P55771 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.65□□□□□ -0.22
PAX9P55771 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PAX9P55771 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
PAX9P55771 DBET-201ENST00000630918 3363 ntBASIC13.65□□□□□ -0.23
PAX9P55771 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
PAX9P55771 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
PAX9P55771 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.64□□□□□ -0.23
PAX9P55771 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
PAX9P55771 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.64□□□□□ -0.23
PAX9P55771 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.64□□□□□ -0.23
PAX9P55771 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.64□□□□□ -0.23
PAX9P55771 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.64□□□□□ -0.23
PAX9P55771 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 AC010491.1-201ENST00000563101 2797 ntBASIC13.64□□□□□ -0.23
PAX9P55771 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
PAX9P55771 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.64□□□□□ -0.23
PAX9P55771 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC13.64□□□□□ -0.23
PAX9P55771 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC13.64□□□□□ -0.23
PAX9P55771 AL138831.2-201ENST00000606564 490 ntBASIC13.64□□□□□ -0.23
PAX9P55771 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
PAX9P55771 AC068418.2-201ENST00000577309 3703 ntBASIC13.64□□□□□ -0.23
PAX9P55771 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms