Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
NR1H2P55055 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H2P55055 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.16■□□□□ 0.18
NR1H2P55055 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H2P55055 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H2P55055 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H2P55055 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H2P55055 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.16■□□□□ 0.18
NR1H2P55055 MIR3917-201ENST00000580971 93 ntBASIC16.16■□□□□ 0.18
NR1H2P55055 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H2P55055 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.16■□□□□ 0.18
NR1H2P55055 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H2P55055 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H2P55055 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H2P55055 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H2P55055 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H2P55055 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.16■□□□□ 0.18
NR1H2P55055 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
NR1H2P55055 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.16■□□□□ 0.18
NR1H2P55055 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H2P55055 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H2P55055 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.16■□□□□ 0.18
NR1H2P55055 AC034236.2-201ENST00000606662 1610 ntBASIC16.16■□□□□ 0.18
NR1H2P55055 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H2P55055 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
NR1H2P55055 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.15■□□□□ 0.18
NR1H2P55055 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NR1H2P55055 AL163051.1-201ENST00000569214 1512 ntBASIC16.15■□□□□ 0.18
NR1H2P55055 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NR1H2P55055 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NR1H2P55055 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
NR1H2P55055 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.15■□□□□ 0.18
NR1H2P55055 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
NR1H2P55055 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NR1H2P55055 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NR1H2P55055 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NR1H2P55055 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NR1H2P55055 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NR1H2P55055 SPDYE13P-201ENST00000445314 798 ntBASIC16.15■□□□□ 0.18
NR1H2P55055 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.15■□□□□ 0.18
NR1H2P55055 BX276092.5-203ENST00000456199 560 ntBASIC16.15■□□□□ 0.18
NR1H2P55055 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.15■□□□□ 0.18
NR1H2P55055 AC092597.1-201ENST00000487352 616 ntBASIC16.15■□□□□ 0.18
NR1H2P55055 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.15■□□□□ 0.18
NR1H2P55055 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.15■□□□□ 0.18
NR1H2P55055 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NR1H2P55055 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.15■□□□□ 0.18
NR1H2P55055 HOXB1-202ENST00000577092 1414 ntBASIC16.15■□□□□ 0.18
NR1H2P55055 AC011498.5-201ENST00000592027 486 ntBASIC16.15■□□□□ 0.18
NR1H2P55055 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
NR1H2P55055 CLEC4GP1-201ENST00000596555 870 ntBASIC16.15■□□□□ 0.18
NR1H2P55055 AL121672.3-201ENST00000608644 468 ntBASIC16.15■□□□□ 0.18
NR1H2P55055 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.15■□□□□ 0.18
NR1H2P55055 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.15■□□□□ 0.18
NR1H2P55055 AL691432.3-201ENST00000621860 400 ntBASIC16.15■□□□□ 0.18
NR1H2P55055 AC012313.10-201ENST00000623509 926 ntBASIC16.15■□□□□ 0.18
NR1H2P55055 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.15■□□□□ 0.18
NR1H2P55055 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.15■□□□□ 0.18
NR1H2P55055 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NR1H2P55055 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NR1H2P55055 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.15■□□□□ 0.18
NR1H2P55055 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.15■□□□□ 0.18
NR1H2P55055 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NR1H2P55055 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NR1H2P55055 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NR1H2P55055 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
NR1H2P55055 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
NR1H2P55055 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
NR1H2P55055 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NR1H2P55055 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
NR1H2P55055 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NR1H2P55055 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NR1H2P55055 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
NR1H2P55055 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NR1H2P55055 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NR1H2P55055 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NR1H2P55055 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NR1H2P55055 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NR1H2P55055 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.14■□□□□ 0.17
NR1H2P55055 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NR1H2P55055 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
NR1H2P55055 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.14■□□□□ 0.17
NR1H2P55055 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NR1H2P55055 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NR1H2P55055 AC026396.1-201ENST00000419388 421 ntBASIC16.14■□□□□ 0.17
NR1H2P55055 AL450487.1-201ENST00000426799 995 ntBASIC16.14■□□□□ 0.17
NR1H2P55055 KRT18P23-201ENST00000435622 1283 ntBASIC16.14■□□□□ 0.17
NR1H2P55055 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
NR1H2P55055 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.14■□□□□ 0.17
NR1H2P55055 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NR1H2P55055 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.14■□□□□ 0.17
NR1H2P55055 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.14■□□□□ 0.17
NR1H2P55055 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.14■□□□□ 0.17
NR1H2P55055 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.14■□□□□ 0.17
NR1H2P55055 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NR1H2P55055 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NR1H2P55055 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.14■□□□□ 0.17
NR1H2P55055 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NR1H2P55055 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
NR1H2P55055 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms