Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PDE1AP54750 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.69■□□□□ 0.9
PDE1AP54750 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE1AP54750 AC092910.1-201ENST00000482027 1129 ntBASIC20.69■□□□□ 0.9
PDE1AP54750 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.69■□□□□ 0.9
PDE1AP54750 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.69■□□□□ 0.9
PDE1AP54750 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.69■□□□□ 0.9
PDE1AP54750 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.69■□□□□ 0.9
PDE1AP54750 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE1AP54750 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE1AP54750 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE1AP54750 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.69■□□□□ 0.9
PDE1AP54750 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PDE1AP54750 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.69■□□□□ 0.9
PDE1AP54750 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.69■□□□□ 0.9
PDE1AP54750 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE1AP54750 AC138932.1-201ENST00000534164 6830 ntBASIC20.69■□□□□ 0.9
PDE1AP54750 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE1AP54750 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PDE1AP54750 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC20.68■□□□□ 0.9
PDE1AP54750 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDE1AP54750 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE1AP54750 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC20.68■□□□□ 0.9
PDE1AP54750 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDE1AP54750 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC20.68■□□□□ 0.9
PDE1AP54750 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE1AP54750 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDE1AP54750 PMS2P1-201ENST00000431037 1228 ntBASIC20.68■□□□□ 0.9
PDE1AP54750 AC108073.2-201ENST00000464002 357 ntBASIC20.68■□□□□ 0.9
PDE1AP54750 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.68■□□□□ 0.9
PDE1AP54750 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.68■□□□□ 0.9
PDE1AP54750 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.68■□□□□ 0.9
PDE1AP54750 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.68■□□□□ 0.9
PDE1AP54750 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.68■□□□□ 0.9
PDE1AP54750 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.68■□□□□ 0.9
PDE1AP54750 AC116407.3-201ENST00000623905 1129 ntBASIC20.68■□□□□ 0.9
PDE1AP54750 AC005593.1-201ENST00000624894 515 ntBASIC20.68■□□□□ 0.9
PDE1AP54750 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20.68■□□□□ 0.9
PDE1AP54750 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDE1AP54750 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE1AP54750 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE1AP54750 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE1AP54750 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.68■□□□□ 0.9
PDE1AP54750 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.68■□□□□ 0.9
PDE1AP54750 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE1AP54750 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE1AP54750 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE1AP54750 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE1AP54750 PCDHB19P-201ENST00000570871 2371 ntBASIC20.67■□□□□ 0.9
PDE1AP54750 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
PDE1AP54750 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE1AP54750 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.67■□□□□ 0.9
PDE1AP54750 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
PDE1AP54750 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE1AP54750 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDE1AP54750 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PDE1AP54750 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDE1AP54750 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE1AP54750 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.67■□□□□ 0.9
PDE1AP54750 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.67■□□□□ 0.9
PDE1AP54750 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.67■□□□□ 0.9
PDE1AP54750 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PDE1AP54750 AC004790.2-201ENST00000623588 572 ntBASIC20.67■□□□□ 0.9
PDE1AP54750 AL139011.1-202ENST00000642063 584 ntBASIC20.67■□□□□ 0.9
PDE1AP54750 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDE1AP54750 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE1AP54750 AC006538.1-201ENST00000567905 1585 ntBASIC20.67■□□□□ 0.9
PDE1AP54750 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PDE1AP54750 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
PDE1AP54750 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE1AP54750 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDE1AP54750 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDE1AP54750 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PDE1AP54750 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.66■□□□□ 0.9
PDE1AP54750 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDE1AP54750 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.66■□□□□ 0.9
PDE1AP54750 TPM4P1-201ENST00000436100 807 ntBASIC20.66■□□□□ 0.9
PDE1AP54750 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDE1AP54750 AC098831.1-202ENST00000438821 336 ntBASIC20.66■□□□□ 0.9
PDE1AP54750 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
PDE1AP54750 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.66■□□□□ 0.9
PDE1AP54750 HLA-A-201ENST00000376802 1334 ntBASIC20.66■□□□□ 0.9
PDE1AP54750 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.66■□□□□ 0.9
PDE1AP54750 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDE1AP54750 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDE1AP54750 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.66■□□□□ 0.9
PDE1AP54750 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC20.66■□□□□ 0.9
PDE1AP54750 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDE1AP54750 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PDE1AP54750 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.66■□□□□ 0.9
PDE1AP54750 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDE1AP54750 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE1AP54750 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE1AP54750 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE1AP54750 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE1AP54750 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDE1AP54750 AL671710.1-201ENST00000610245 2349 ntBASIC20.65■□□□□ 0.9
PDE1AP54750 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE1AP54750 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE1AP54750 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms