Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCK1P35558 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.91■□□□□ 0.46
PCK1P35558 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCK1P35558 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCK1P35558 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.91■□□□□ 0.46
PCK1P35558 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCK1P35558 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCK1P35558 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCK1P35558 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
PCK1P35558 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCK1P35558 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCK1P35558 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCK1P35558 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCK1P35558 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.91■□□□□ 0.46
PCK1P35558 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCK1P35558 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCK1P35558 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCK1P35558 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.91■□□□□ 0.46
PCK1P35558 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCK1P35558 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCK1P35558 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCK1P35558 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.91■□□□□ 0.46
PCK1P35558 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.91■□□□□ 0.46
PCK1P35558 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.91■□□□□ 0.46
PCK1P35558 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.91■□□□□ 0.46
PCK1P35558 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.91■□□□□ 0.46
PCK1P35558 AL353135.1-201ENST00000606729 504 ntBASIC17.91■□□□□ 0.46
PCK1P35558 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCK1P35558 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.91■□□□□ 0.46
PCK1P35558 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCK1P35558 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
PCK1P35558 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCK1P35558 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCK1P35558 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PCK1P35558 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCK1P35558 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PCK1P35558 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.91■□□□□ 0.46
PCK1P35558 AC005915.1-201ENST00000624912 2018 ntBASIC17.91■□□□□ 0.46
PCK1P35558 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCK1P35558 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PCK1P35558 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.91■□□□□ 0.46
PCK1P35558 AC106886.4-201ENST00000623557 2502 ntBASIC17.91■□□□□ 0.46
PCK1P35558 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCK1P35558 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCK1P35558 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PCK1P35558 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCK1P35558 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
PCK1P35558 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCK1P35558 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCK1P35558 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCK1P35558 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCK1P35558 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCK1P35558 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.9■□□□□ 0.46
PCK1P35558 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCK1P35558 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCK1P35558 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PCK1P35558 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCK1P35558 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCK1P35558 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCK1P35558 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PCK1P35558 FGFR3P6-201ENST00000457012 610 ntBASIC17.9■□□□□ 0.46
PCK1P35558 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
PCK1P35558 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.9■□□□□ 0.46
PCK1P35558 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.9■□□□□ 0.46
PCK1P35558 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.9■□□□□ 0.46
PCK1P35558 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.9■□□□□ 0.46
PCK1P35558 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCK1P35558 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.9■□□□□ 0.46
PCK1P35558 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PCK1P35558 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCK1P35558 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCK1P35558 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCK1P35558 AC068418.2-201ENST00000577309 3703 ntBASIC17.9■□□□□ 0.46
PCK1P35558 AL596257.1-201ENST00000641463 2694 ntBASIC17.9■□□□□ 0.46
PCK1P35558 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCK1P35558 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PCK1P35558 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.9■□□□□ 0.46
PCK1P35558 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
PCK1P35558 NCF1C-201ENST00000438382 1427 ntBASIC17.89■□□□□ 0.46
PCK1P35558 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.46
PCK1P35558 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.46
PCK1P35558 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCK1P35558 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCK1P35558 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCK1P35558 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.89■□□□□ 0.45
PCK1P35558 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.89■□□□□ 0.45
PCK1P35558 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCK1P35558 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PCK1P35558 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCK1P35558 AL513477.1-201ENST00000602865 2407 ntBASIC17.89■□□□□ 0.45
PCK1P35558 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.89■□□□□ 0.45
PCK1P35558 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCK1P35558 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCK1P35558 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.89■□□□□ 0.45
PCK1P35558 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCK1P35558 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.89■□□□□ 0.45
PCK1P35558 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PCK1P35558 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCK1P35558 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCK1P35558 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms