Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT9P35527 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT9P35527 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KRT9P35527 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT9P35527 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.61■□□□□ 0.57
KRT9P35527 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.61■□□□□ 0.57
KRT9P35527 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT9P35527 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT9P35527 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT9P35527 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT9P35527 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT9P35527 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KRT9P35527 HLA-A-202ENST00000376806 1854 ntBASIC18.61■□□□□ 0.57
KRT9P35527 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT9P35527 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
KRT9P35527 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KRT9P35527 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT9P35527 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT9P35527 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT9P35527 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.61■□□□□ 0.57
KRT9P35527 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KRT9P35527 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
KRT9P35527 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.61■□□□□ 0.57
KRT9P35527 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.61■□□□□ 0.57
KRT9P35527 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.61■□□□□ 0.57
KRT9P35527 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.61■□□□□ 0.57
KRT9P35527 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KRT9P35527 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT9P35527 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.61■□□□□ 0.57
KRT9P35527 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
KRT9P35527 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
KRT9P35527 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT9P35527 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT9P35527 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
KRT9P35527 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.61■□□□□ 0.57
KRT9P35527 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT9P35527 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT9P35527 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT9P35527 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT9P35527 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.6■□□□□ 0.57
KRT9P35527 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT9P35527 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT9P35527 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KRT9P35527 AC092364.2-201ENST00000596710 2692 ntBASIC18.6■□□□□ 0.57
KRT9P35527 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
KRT9P35527 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT9P35527 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
KRT9P35527 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
KRT9P35527 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.6■□□□□ 0.57
KRT9P35527 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KRT9P35527 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT9P35527 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.6■□□□□ 0.57
KRT9P35527 AC114341.1-201ENST00000618070 349 ntBASIC18.6■□□□□ 0.57
KRT9P35527 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.6■□□□□ 0.57
KRT9P35527 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT9P35527 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT9P35527 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT9P35527 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
KRT9P35527 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
KRT9P35527 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KRT9P35527 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
KRT9P35527 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT9P35527 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT9P35527 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT9P35527 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT9P35527 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT9P35527 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.6■□□□□ 0.57
KRT9P35527 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.6■□□□□ 0.57
KRT9P35527 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT9P35527 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
KRT9P35527 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.59■□□□□ 0.57
KRT9P35527 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
KRT9P35527 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT9P35527 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
KRT9P35527 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT9P35527 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.59■□□□□ 0.57
KRT9P35527 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.59■□□□□ 0.57
KRT9P35527 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT9P35527 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.59■□□□□ 0.57
KRT9P35527 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT9P35527 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT9P35527 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
KRT9P35527 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT9P35527 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
KRT9P35527 AC003669.1-201ENST00000334569 611 ntBASIC18.59■□□□□ 0.57
KRT9P35527 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.59■□□□□ 0.57
KRT9P35527 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.59■□□□□ 0.57
KRT9P35527 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
KRT9P35527 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT9P35527 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.59■□□□□ 0.57
KRT9P35527 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.59■□□□□ 0.57
KRT9P35527 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.59■□□□□ 0.57
KRT9P35527 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
KRT9P35527 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.59■□□□□ 0.57
KRT9P35527 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.59■□□□□ 0.57
KRT9P35527 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.59■□□□□ 0.57
KRT9P35527 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
KRT9P35527 AL162727.3-201ENST00000635661 2787 ntBASIC18.59■□□□□ 0.57
KRT9P35527 PCDHA1-201ENST00000378133 2726 ntBASIC18.59■□□□□ 0.57
KRT9P35527 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms